DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad88C and fat1a

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:XP_021324881.1 Gene:fat1a / 406172 ZFINID:ZDB-GENE-050425-1 Length:4666 Species:Danio rerio


Alignment Length:2394 Identity:551/2394 - (23%)
Similarity:888/2394 - (37%) Gaps:759/2394 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 SISIQVIILTTLISLVASN--RP----PRFAIDGQSEI-----VLRLKESPETKVGTLIYTLKGY 91
            |:|.||     ||.::.:|  ||    |::.:|...:.     |||:..:.:.:...|.|||.. 
Zfish  1458 SVSTQV-----LIKVIDTNNHRPQFSKPKYEVDVSEDTPPETEVLRITATDQDEKNKLTYTLLS- 1516

  Fly    92 DPDNDPLTFGKRNSHDSEIIRIE-NTGGNEAKIFLAKELDRELQDEYAIVLTLTDSHYS-DHNYV 154
              ..||.:..|        .|:: .||    .::.|:.||.|...::.:.:.:.|.... ..|.|
Zfish  1517 --STDPFSLRK--------FRLDPGTG----VLYTAERLDHETMHQHTLTVMVRDQDIPVKRNLV 1567

  Fly   155 TQSFLLLVEDINDNVPTF--LPYQNAIEIPEGSAPG-VVSTLEATDADEGAYGQVVYYLQELDGD 216
              ..::.|:|.|||.|.|  .||..  .:.|.:|.| .|..:.|.|.|:|...:::|   .::..
Zfish  1568 --RVIVNVQDTNDNAPWFSGAPYVG--RVFESAATGSAVLQVSALDKDKGQNAEIIY---SIESG 1625

  Fly   217 NDVFSIATHQGKGILRLQKELDYERKSLYQLRVLAIDRANQGPINTGTAAI-------------- 267
            |...|.|.....|.:.:.||||...|:.::|.|.|.|:..  |..:||||:              
Zfish  1626 NVANSFAIDPVLGTITVAKELDRNNKNRFELTVKASDKGT--PPLSGTAAVDITVTISDNAIPKF 1688

  Fly   268 ----------------------------------------------------------------- 267
                                                                             
Zfish  1689 AEKEFSAEVSETVLPGAFVSLVTANSQSSVFYQIKDGNVNGAFDINPNSGVVVTHSVLDYETIPS 1753

  Fly   268 -------------------LVKVKDLEDQPPEFVEVQAVARIAEDAPVGTKVLR-------VRAI 306
                               |:.:||..|..|.|::.|....::|.:||.:.||.       :||:
Zfish  1754 YKLTIQGTNMAGLASNTTLLIHLKDENDNAPVFIQDQFAGMVSESSPVNSVVLTKDNTPLVIRAL 1818

  Fly   307 DGDRGINNPIAYSLE---ANDLFDINPHTGIVHTLTKLDREEQSD-------------------- 348
            |.||..|:.:.|.:.   |::.|.|:..||.:.|:::||.|::|.                    
Zfish  1819 DTDRDANSRLVYQIVEPFAHNYFAIDSSTGAIRTISELDYEQRSVFRFSVQVHDMGIPRHFAEKA 1883

  Fly   349 --------QVN---------------------GAHILRISATEL-SKSNT--------------- 368
                    .||                     |..::.::|::. |..|:               
Zfish  1884 ANVTIEILDVNDCPPQFSQDLYETTVLVPTYKGVEVITVNASDADSGPNSRLFYSIVEGNIGEKF 1948

  Fly   369 QMAPTT------------VRTEVTVIVSD----------VN-----DEIPTFGETVYRCEVNENA 406
            :|.|.|            .|.|:.|.|||          :|     :....|.:..|:..|.||:
Zfish  1949 KMDPVTGVITIQNVTQLRSRYELRVRVSDGRFSKTSLVKINVRENKESTLRFTQESYKAFVPENS 2013

  Fly   407 --------------QTNTPL---------NFIDEEVQNVV------FDHDEGNNGTFRLFLDPPN 442
                          |.|.||         .|.......|:      ||.:|  .|.|.:.::...
Zfish  2014 SEKKTLAVIAAVGNQVNEPLFYTILNPDKRFTISRTSGVLSSTGTPFDREE--QGVFDIVVEVTR 2076

  Fly   443 D-------------LFEIV---PELAVN-------------------------------EANFML 460
            |             :.|.|   |.:.||                               |.|:.|
Zfish  2077 DDKSPDVAHVLVTVIIEDVNDNPPVFVNLPYQALVQVDADVDHIITKVTAVDADINENAEINYHL 2141

  Fly   461 RVKN-------------SKSLDFEQF-TEVNFTIFAREVDEPSRWSSAHVQIFIRDQNDNFPEFS 511
            :..|             :|.||.:.. ||...|:.||:..||:..||..|.|.:  .|...|.|.
Zfish  2142 QELNEFVQISTDGEISLTKKLDKDSVNTEFIITVVARDGGEPALSSSVEVPILV--VNKAMPVFE 2204

  Fly   512 QTIYNASVLENSEQDTIITHVQAVDVDSGDYGTMGIRYTNLRGGIAHLLNLNPITGVITIKQAGG 576
            :..|:..:.||.:..|.|.|:||.|.:.     ..|.||...|...:...:|..||||.:.:   
Zfish  2205 KAFYSLEIPENIQLLTPIVHIQANDSEG-----PRIVYTITEGDPLNQFTINFNTGVIQVVK--- 2261

  Fly   577 TAFDREIISRHYLTVEAIDNAGQGNRNTAQIIVDIL--DVNDNAPTFPQRQYETKLLENQAEFET 639
             ..|.|....:.|:|.|.|:.....   |::.|||:  |||||.|.|..:.|...|.|......:
Zfish  2262 -TLDFETHPAYKLSVRATDSLTGAK---AEVFVDIILEDVNDNPPVFHTKLYNASLSEASVIGTS 2322

  Fly   640 PLQLEARDADLNGTENSQVT-YEIVEGLYRS--NFTIDPQSGLLRPVHSFDFEELVDGSSRRSDP 701
            .|::.|.|||   |.|::|. |:|||...:|  .|:||..:|.:......|.||   ..|.|   
Zfish  2323 VLEVSATDAD---TGNNKVLFYQIVEDKDKSFDYFSIDRDTGTIWTTRMLDHEE---KPSHR--- 2378

  Fly   702 YTGGSFSIREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPEDLPGGSSVL 766
                        ||:||.|.|:|.||:.|.|||.|.|:|||.|:|.|:.|..||.|..|.|..|.
Zfish  2379 ------------LLIRAVDGGVPALSSEVMVLIDVMDLNDNTPVFSQNVYEATVSELAPRGHFVT 2431

  Fly   767 QVTAIDRDGSAPNNVVVYRIQTGAGDKFIINSETGVISVAHGANLDPDLTESKRSLYTLSVIALD 831
            ||.|.|.|.|....:....:....|..|.::..||.:.:::  :..|.:    .|||.::|...|
Zfish  2432 QVQASDADISDSGKLEFSILSGNEGQNFAMDPNTGALVISN--HRKPHM----ESLYNINVSVSD 2490

  Fly   832 GGLGNSQLMTTCTVNISIQDVNNKPPVLKEMP-ALQILENTPVGTLVYRIQATDLDHKAILRYKL 895
            |...:|.:     |.:::...|...|...::. .:::|||:||||||...||||.|         
Zfish  2491 GVFRSSAI-----VKVNVISANFHNPTFNQVDYVVELLENSPVGTLVAEAQATDDD--------- 2541

  Fly   896 NPEHCEGRTEEGALVKSSEYDFLGAFEVDSI---------EGTLKVVKLLDRERVEHIKLAITVE 951
                            |..|..|....|:.|         .|.:..::.||||..  ::..|.:.
Zfish  2542 ----------------SGTYGRLTYHIVNDIAKDKFSISENGEIFTLESLDRENA--LEKVIPIS 2588

  Fly   952 DLAAAKGRQIAEGFLSIQVL--DENDNNPKFRLPFYRQSITENSINGAMIVNVLASDVDK--NRT 1012
            .:|...|.::  ||.::.|:  |.|||.|:||...||.::..:...|..|:.:.|||:|:  |..
Zfish  2589 LIAKDGGGKV--GFCTVNVILTDINDNAPQFRAADYRVNVASDVSRGTTILKIAASDMDEGSNAD 2651

  Fly  1013 ITYALE------------------------------------------GNPTYRSLM-------- 1027
            |||::|                                          ||||..|::        
Zfish  2652 ITYSIETDADNVEENFEIHQFSGVIVTKESLIGLENQMYTFLVRAKDGGNPTKSSVVPVYVKILA 2716

  Fly  1028 -----------H---------------------------------------------LDPQTGEI 1036
                       |                                             :||.:|.:
Zfish  2717 PEVPVPKFIESHYRFAIEEDLSLGSEIDVIQAESDQPVFYSLVKGNTPESNQDEVFVVDPSSGSL 2781

  Fly  1037 VVASKIDHEQHQWLNFSVRATDSGIPAR-SSLVDVYITVLDENDNNPYFVGGSKNYTISENAAPG 1100
            .:..|:|||..:|...:::|......:: .|.||:.|.|.|.|||.|.|........:.||...|
Zfish  2782 KLDKKLDHESTKWYQLTLQAQSEYEGSKVVSAVDISIQVKDVNDNRPLFESNPYEAFVVENLPGG 2846

  Fly  1101 TRVATLQAGDADSGDFGKITFLMDRISSQGK----FTIDADTGVLTVADRLDRESKDSYNLVIEA 1161
            |.|..::|.|.|||..|.:.:.:|.......    |.|::::|.:|....||||:::.|.:.:.|
Zfish  2847 TSVIQVKATDLDSGTNGHVVYNLDPNQETRDIVELFAINSESGWITTLKELDRETRNKYTVSVLA 2911

  Fly  1162 WDNYQFGFLAGESRNAFKQVFISILDENDNPP------------EVDLPMSCVLITEYHELHERV 1214
            .|......|...:|     |.::::|.|||||            |.|.|...:.|....:|    
Zfish  2912 TDRGDKVQLMASTR-----VDVTVVDVNDNPPKFTAEIYKGTVSEDDPPGGVIAILSTTDL---- 2967

  Fly  1215 ASIVGKDADDPTTPNGRLDFAITRGNKDGMFELRQIDA-WNAQIFASKSL-RNRYGNYSLTITTR 1277
                     |....|.::.:.||.|:..|.|.:..... |...:  .|.| |....||.|.||..
Zfish  2968 ---------DTEENNKQISYFITGGDPLGQFAIEHTQGEWKVSV--RKPLDREEKDNYLLNITAT 3021

  Fly  1278 DMGLPANIVHNTLDICVSDFNDHAPVFVRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVR 1342
            |....|..|   :::.|.|.||::|:..:..:..:|  ||::..|.||||..|:|.|:..||.:.
Zfish  3022 DGTFTAKAV---VEVKVLDANDNSPICEKSFYMESV--PEDSPAGRLILQVSATDADIRSNAQIS 3081

  Fly  1343 YRLKPDPLG-SYKMFEVDGSTGELFLKEQLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRN 1406
            |.|    || ..:.|.:|..||||.....|:||::::|::::.|.|.|   ....:.::.|.|.:
Zfish  3082 YEL----LGPGSEHFSIDSETGELKTLLPLDREEEEVHKMKVRALDGG---GRFCEAEVEITVED 3139

  Fly  1407 VNDYEPQFMVNEISVNFTEHSDPGSERIKLPDTIDKDQLELDDPNDTPSQVCYFIVNGNEAGYFR 1471
            |||..|||..:..:....|:::..:...:|..:      :||  ....:::.|.:::..: |.|.
Zfish  3140 VNDNPPQFTTDPYTFTVFENTEINTPVARLYAS------DLD--TGANAEILYSLLDSAD-GVFS 3195

  Fly  1472 LDPETHILTVDRELDREVIANFTLYVRATENCRNDSISGGEKRRRMGIEINNR---------LGG 1527
            ::.||.::.:||.||||:.:.:||..:||:......:|.........::||:.         ...
Zfish  3196 IEEETGVVRLDRPLDRELQSLYTLRAQATDRGSPRHLSSHTTVSVSILDINDNPPVFERREYTAT 3260

  Fly  1528 IVHNQQFGYDRFKHSRQLRSTESNEYGPEDAELLSYEAYDSSQE-----DP-TGGLATTHPELD- 1585
            :..:...|....:.....|.||:   |.|    ::|...:.::.     || |||:....| || 
Zfish  3261 VAEDIPVGTQVLRIHAASRDTEA---GTE----ITYAIINGNERGAFRVDPQTGGVFVIEP-LDY 3317

  Fly  1586 --------------------STVIKVKVRVLDINDNPPRFRSKIFTGGITTNADFGLKFMRVEAT 1630
                                |.:..|.:.:.|:|||.|.|...|::..|:.:|:.|...:.|.|.
Zfish  3318 ETAHEFYLTVEATDGGTPSLSDLATVNINLTDVNDNSPVFNQDIYSAVISEDAELGKTVLTVMAD 3382

  Fly  1631 DADEGDNGRIGYYQVGEIRQTLSEGLENVRKAPFLLDQETGEVQLN--FDPQKGMKGYFDFVVLA 1693
            |||...:        .::|.::.:|.:.   :||.:|...|||::.  .|.:| ..|| ...|||
Zfish  3383 DADGPSS--------NQVRFSIIDGNQG---SPFTIDPVRGEVKVARLLDREK-TSGY-TLTVLA 3434

  Fly  1694 NDTSGMK---------DVAHV-----------FIYLLREDQKVRF-------------------- 1718
            :|.....         ||:.:           :..:::|:|.:..                    
Zfish  3435 SDNGSPARSSSATINVDVSDINDNPPIFSQANYSIIIQENQPIGASVLQLTVSDRDASHNGPPFT 3499

  Fly  1719 ----------VFRLQPDE-----------------LRSRV-DSFRDTLSNITESIVNIDEIKVHE 1755
                      .||:.|..                 |:::| ||.|..|.:.....|.:.|..::.
Zfish  3500 FSIIRGNEGDFFRITPQGVLVSAATLSRQTQEFYLLQAQVTDSGRPPLVSTAFVSVRLIEESIYP 3564

  Fly  1756 NKDGSVD---KTKTDLY----MHLVEREDNSIYEVSEVLKLIDSHIESLN-GLFKELNVLDTQAA 1812
            .....:|   .|.||.|    :..:...|..:|:........||...|.| |||      ....|
Zfish  3565 PSILPLDIFITTATDEYSGGVLGKIHATDQDVYDTLTYSLAPDSSSTSENSGLF------SVSPA 3623

  Fly  1813 EAQLLTAGPSRGPLFVWLIFTNLFLATLLVVTIALCASQRNGYRRQLRAAKVNI 1866
            :.:|:..|......:|            |.:|:.      :|  |...||:|||
Zfish  3624 DGKLVARGNLDAGQYV------------LNITVT------DG--RFTAAARVNI 3657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637 20/93 (22%)
Cadherin_repeat 179..276 CDD:206637 30/195 (15%)
Cadherin_repeat 287..388 CDD:206637 38/202 (19%)
Cadherin_repeat 397..506 CDD:206637 40/198 (20%)
Cadherin_repeat 514..617 CDD:206637 31/104 (30%)
Cadherin_repeat 625..742 CDD:206637 41/119 (34%)
Cadherin_repeat 751..853 CDD:206637 26/101 (26%)
Cadherin_repeat 865..976 CDD:206637 32/121 (26%)
Cadherin_repeat 985..1080 CDD:206637 35/203 (17%)
Cadherin_repeat 1090..1191 CDD:206637 28/104 (27%)
CA 1221..1302 CDD:214520 23/82 (28%)
Cadherin_repeat 1312..1409 CDD:206637 33/97 (34%)
Cadherin_repeat 1418..>1502 CDD:206637 19/83 (23%)
Cadherin_repeat 1617..1710 CDD:206637 25/114 (22%)
fat1aXP_021324881.1 Cadherin_repeat 36..142 CDD:206637
Cadherin_repeat 152..251 CDD:206637
E_set 272..353 CDD:324323
Cadherin_repeat 369..457 CDD:206637
Cadherin_repeat 465..563 CDD:206637
Cadherin_repeat 574..662 CDD:206637
Cadherin_repeat 721..816 CDD:206637
Cadherin_repeat 824..921 CDD:206637
Cadherin_repeat 930..1026 CDD:206637
Cadherin_repeat 1041..1133 CDD:206637
Cadherin_repeat 1141..1239 CDD:206637
Cadherin_repeat 1261..1342 CDD:206637
Cadherin_repeat 1361..1473 CDD:206637 7/19 (37%)
Cadherin_repeat 1482..1579 CDD:206637 24/113 (21%)
Cadherin_repeat 1587..1683 CDD:206637 29/102 (28%)
Cadherin_repeat 1692..1782 CDD:206637 3/89 (3%)
Cadherin_repeat 1795..1895 CDD:206637 23/99 (23%)
Cadherin_repeat 1905..1990 CDD:206637 13/84 (15%)
Cadherin_repeat 2004..2098 CDD:206637 18/95 (19%)
Cadherin_repeat 2106..2196 CDD:206637 18/91 (20%)
Cadherin_repeat 2208..2300 CDD:206637 31/103 (30%)
Cadherin_repeat 2309..2407 CDD:206637 41/118 (35%)
Cadherin_repeat 2415..2507 CDD:206637 26/102 (25%)
Cadherin_repeat 2518..2613 CDD:206637 32/123 (26%)
Cadherin_repeat 2622..2715 CDD:206637 18/92 (20%)
Cadherin_repeat 2728..2826 CDD:206637 17/97 (18%)
Cadherin_repeat 2834..>2915 CDD:206637 23/80 (29%)
Cadherin_repeat 2944..3041 CDD:206637 27/114 (24%)
Cadherin_repeat 3050..3143 CDD:206637 34/101 (34%)
Cadherin_repeat 3151..3248 CDD:206637 22/105 (21%)
Cadherin_repeat 3256..3353 CDD:206637 19/104 (18%)
Cadherin_repeat 3361..3458 CDD:206637 27/109 (25%)
Cadherin_repeat 3467..3558 CDD:206637 12/90 (13%)
Cadherin_repeat 3583..3659 CDD:206637 22/101 (22%)
LamG 3883..4011 CDD:214598
EGF_CA 4044..4077 CDD:238011
EGF_CA 4080..4115 CDD:238011
EGF 4120..4150 CDD:306513
EGF_CA 4154..4190 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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