DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad88C and kug

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:NP_001027138.2 Gene:kug / 40191 FlyBaseID:FBgn0261574 Length:4699 Species:Drosophila melanogaster


Alignment Length:2157 Identity:534/2157 - (24%)
Similarity:873/2157 - (40%) Gaps:474/2157 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 QSEIVLRLKE----SPE--TKVGTLIYTLKGYDPDNDPLTFG--KRNSHDS----EIIRIENTGG 118
            ::::.:.:|:    :||  ||      |.....|.::||.:|  :.|..|:    .|.|:|...|
  Fly   274 KTKVSISVKQVNFYAPEIFTK------TFSSVTPTSNPLIYGIVRVNDKDTGINGNIGRLEIVDG 332

  Fly   119 NEAKIFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFLLLVEDI------------------ 165
            |....||.|.  .|.:|||.|.|. ..:|.:..::: .:..||.||:                  
  Fly   333 NPDGTFLLKA--AETKDEYYIELN-QFAHLNQQHFI-YNLTLLAEDLGTPRRFAYKSVPIQIKPE 393

  Fly   166 NDNVPTFLPYQNAIEIPEGSAP--GVVSTLEATDADEGAYGQVVYYLQELDG-DNDVFSIATHQG 227
            :.|:|.|......:.||| :||  ..|..|:.:|.|.|.  ..:.||:.:.| :.|.|.|  :..
  Fly   394 SKNIPIFTQEIYEVSIPE-TAPINMPVIRLKVSDPDLGK--NALVYLEIVGGNEGDEFRI--NPD 453

  Fly   228 KGILRLQKELDYERKSLYQLRVLAIDRANQGPINTGTAAILVKVKDLEDQPPEFVEVQAVARIAE 292
            .|:|...|:||.|:||.|.|.|.|||:||.|.....:|.:.:.|:|:.|..|.|..|..|..|.|
  Fly   454 SGMLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINE 518

  Fly   293 DAPVGTKVLRVRAIDGDRGINNPIAYSL-EANDL-FDINPHTGIVHTLTKLDREEQSDQVNGAHI 355
            :...|:.|:::.|.|.|.|.|:.|:||: ..|.: |:|:..:|||.|.:.||.|..  :.|...|
  Fly   519 NNLAGSFVVKLTAKDRDSGENSYISYSIANLNAVPFEIDHFSGIVKTTSLLDFETM--KRNYELI 581

  Fly   356 LRISATELSKSNTQMAPTTVRTEV--TVIVSDVNDEIPTFGETVYRCEVNENAQTNTPL---NFI 415
            :|.|...|        |...:||:  :::|.|:||..|.|.......:|.::|...|.:   :.|
  Fly   582 IRASDWGL--------PYRRQTEIKLSIVVKDINDNRPQFERVNCYGKVTKSAPMGTEVFVTSAI 638

  Fly   416 DEEVQNVV-FDHDEGN-NGTFRLFLDP-------------------------------------- 440
            |.:..::: :...:|| :|.|.  |||                                      
  Fly   639 DFDAGDIISYRLSDGNEDGCFN--LDPTSGSLSISCDLKKTTLTNRILKVSATDGTHFSDDLIIN 701

  Fly   441 ----PNDL------------FE---------IVPELAVNEANFMLRVKNSKSLDFEQFTEVNFTI 480
                |.||            ||         :...|::.|.|      |.||.....|::::.| 
  Fly   702 VHLMPEDLGGDSSILHGFGSFECRETGVARRLAETLSLAEKN------NVKSASPSVFSDLSLT- 759

  Fly   481 FAREVDEPSRWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTM 545
                   |||:.          ||.:.|||.......|:.|:.:....:..::|.|.|.|..|.:
  Fly   760 -------PSRYG----------QNVHRPEFVNFPQELSINESVQLGETVAWIEAKDRDLGYNGKL 807

  Fly   546 GIRYTNLRGGIAHLLNLNPITGVITIKQAGGTAFDREIISRHYLTVEAIDNAGQGNRNTAQII-V 609
            ....::  |....:..::|..|.:.|  .|  ..|||..:.:.|.:...| .|...::|:::: :
  Fly   808 VFAISD--GDYDSVFRIDPDRGELQI--IG--YLDRERQNEYVLNITVYD-LGNPTKSTSKMLPI 865

  Fly   610 DILDVNDNAPTFPQRQYETKLLENQAEFETPLQ-LEARDADLNGTENSQVTYEIVEGLYRSNFTI 673
            .|||||||.|.. |:...|..|...|...|.:. |.|.||| :|. |:||||.:  .:..|:||:
  Fly   866 TILDVNDNRPVI-QKTLATFRLTESARIGTVVHCLHATDAD-SGI-NAQVTYAL--SVECSDFTV 925

  Fly   674 DPQSGLLRPVHSFDFEELVDGSSRRSDPYTGGSFSIREIDLLVRARDSGIPMLSTVVPVLIYVQD 738
            :..:|.||.....|.|        :.|.|.          |.:.|:|.|.|:||:...|.:.|.|
  Fly   926 NATTGCLRLNKPLDRE--------KQDNYA----------LHITAKDGGSPVLSSEALVYVLVDD 972

  Fly   739 VNDNAPIFQQSFYAKTVPEDLPGGSSVLQVTAIDRDGSAPNNVVVYRIQTGAGDK--FIINSETG 801
            ||||||:|....|...|.||||.|:.:..:.|:|.| ..||..:.:.::....|:  |.|:..||
  Fly   973 VNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDED-IGPNAEIQFSLKEETQDEELFRIDKHTG 1036

  Fly   802 VISVAHGANLDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVNNKPPVLKEMPAL- 865
            .|...  ..||.:    .:.::.|.|.|:||  |:..|.:..::.|.|.|||..    :..|.. 
  Fly  1037 AIRTQ--GYLDYE----NKQVHNLIVSAIDG--GDPSLTSDMSIVIMIIDVNEN----RFAPEFD 1089

  Fly   866 ------QILENTPVGTLVYRIQATDLDHKAILRYKLNPEHCEGRTEEGALVKSSEYDFLGAFEVD 924
                  ::.||.|.||.|..:.|.|:| ...|..|:......|             |.||.|.|:
  Fly  1090 DFVYEGKVKENKPKGTFVMNVTARDMD-TVDLNSKITYSITGG-------------DGLGIFAVN 1140

  Fly   925 SIEGTLKVVKLLDRERVEHIKLAITVEDLAAAKGRQIAEGFLSIQVLDENDNNPKFRLPFYRQSI 989
            . :|::..:..||.|......|.:..:|.|........|.:  |||.:||||.|....|.|..::
  Fly  1141 D-QGSITSLSQLDAETKNFYWLTLCAQDCAIVPLSNCVEVY--IQVENENDNIPLTDKPVYYVNV 1202

  Fly   990 TENSINGAMIVNVLA--SDVDKNRTITY-ALEGNPTYRSLMHLDPQTGEI-VVASKIDHEQHQWL 1050
            ||.|:....|:.:.|  .|:|..:|||| .:.||..  ....:|.:||.| ....|:|.|.....
  Fly  1203 TEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLV--GYFEIDSKTGVIKTTERKLDRENQAEH 1265

  Fly  1051 NFSVRATDSGIPARSSLVDVYITVLDENDNNPYFVGGSKNYTISENAAPGTRVATLQAGDADSGD 1115
            ...|..:|:|.|..||...:.::|||.|||:|.|........:..:|.....:..:.|.|:|||:
  Fly  1266 ILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDSGE 1330

  Fly  1116 FGKITFLMDRISSQGKFTIDADTGVLTVADRLDRESKDSYNLVIEAWDNYQFGFLAGESRNAFKQ 1180
            .|:||:.:.....:.||.||:..|.:.:|..||  |.:.:.:.|:|.||    .:..:|:.|  :
  Fly  1331 NGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLD--SDNEFEIHIKAEDN----GIPKKSQTA--R 1387

  Fly  1181 VFISILDENDNPPEVDLPM-----SCVLITEYHELHERVASIVGKDADDPTTPNGRLDFAITRGN 1240
            |.|.::..|.|.....|.:     :.|.:||..:....|..|:..|.|     |.:|.:.|:.||
  Fly  1388 VNIVVVPVNPNSQNAPLIVRKTSENVVDLTENDKPGFLVTQILAVDDD-----NDQLWYNISNGN 1447

  Fly  1241 KDGMFELRQIDAWNAQIFASKSL-RNRYGNYSLTITTRDMGLPANIVHNTLDICVSDFNDHAPVF 1304
            .|..|.:.|.   |..|..||.| .....:|:|||:..|....|   ...|.:.|.|.||:.|.|
  Fly  1448 DDNTFYIGQD---NGNILLSKYLDYETQQSYNLTISVTDGTFTA---FTNLLVQVIDINDNPPQF 1506

  Fly  1305 VRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKMFEVDGSTGELFLKE 1369
            .:.:::  |.|.||....::|:|.:|:|.|..:..........|| .|..:|.:|..:|.:.:.:
  Fly  1507 AKDVYH--VNISENIEEESVIMQLHATDRDEDKKLFYHLHATQDP-SSLALFRIDSISGNVIVTQ 1568

  Fly  1370 QLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISVNFTEHSDPGSERI 1434
            :|:.||...|.:.:...|||.| ...:...:.:.|.:.||:.|:|....|.....|.:..||   
  Fly  1569 RLDFEKTAQHILIVFVKDQGAP-GKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGS--- 1629

  Fly  1435 KLPD--TIDKDQLELDDPNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREVIANFTLYV 1497
            ||.:  .||:|       :...:::.|.|:.||....|.:||...|:|:...|:...|..:.|.|
  Fly  1630 KLAEVRAIDRD-------SGHNAEIQYSIITGNVGSVFEIDPTFGIITLAGNLNINKIQEYMLQV 1687

  Fly  1498 RATENCRNDSISGGEKRRRMGIEI--------------NNRLGGIVHNQQFGYDRFKHSRQLRST 1548
            :|.: ..|..:|.     ::.:.|              ||....|..|...|  .|......||:
  Fly  1688 KAVD-LGNPPLSS-----QIPVHIIVTMSENDPPKFPTNNIAIEIFENLPIG--TFVTQVTARSS 1744

  Fly  1549 ESNEYGPEDAELLSYEAYDSSQEDPTGGLATTHPELDSTVIKV-------------------KVR 1594
            .|..:     .::|....:|.:.:|:.|:...:..:|...|||                   .:.
  Fly  1745 SSIFF-----NIISGNINESFRINPSTGVIVINGNIDYESIKVFNLTVKGTNMAAESSCQNIIIH 1804

  Fly  1595 VLDINDNPPRFRSKIFTGGITTNADFGLKFMRV----------EATDADEGDNGRIGYYQVGEIR 1649
            :||.|||.|.|....:.|.:..:|..|...::|          :..|||.|.||.:.|:.|.::.
  Fly  1805 ILDANDNIPYFVQNEYVGALPESAAIGSYVLKVHDSSKDHLTLQVKDADVGVNGMVEYHIVDDLA 1869

  Fly  1650 QTLSEGLENVRKAPFLLDQETGEV----QLNFDPQKGMKGYFDFVVLANDTSGMK----DVAHVF 1706
            :..           |.:|..||.:    ||:::...|    :.|.|..:|....|    ..|||.
  Fly  1870 KNF-----------FKIDSTTGAIELLRQLDYETNAG----YTFDVTVSDMGKPKLHSTTTAHVT 1919

  Fly  1707 IYLLREDQKVRFVFRLQP--DELRSRVDSFRDTLSNITESIVNIDEIKVHENKDGSVDKTKTDLY 1769
            |.::.       |....|  :|....|..|..|..|:.        ::....||...|..:.|  
  Fly  1920 IRVIN-------VNDCPPVFNERELNVTLFLPTFENVF--------VRQVSAKDADNDTLRFD-- 1967

  Fly  1770 MHLVEREDNSIYEVSEVLKLIDS----------------HIESLNGLF--------KELNVLDTQ 1810
              :|:...|..:::.:...:|.:                |:.:.:|:|        |.|:.:|:.
  Fly  1968 --IVDGNTNECFQIEKYTGIITTRNFEILNNENDRDYALHVRASDGIFSAILIVKIKVLSAIDSN 2030

  Fly  1811 AA----------------------------------------EAQLLTAGPSRGPLFVWLIFTNL 1835
            .|                                        ..||...|.|.|.|....:..:.
  Fly  2031 FAFQRESYRFSAFENNTKVATIGLVNVIGNTLDENVEYRILNPTQLFDIGISSGALKTTGVIFDR 2095

  Fly  1836 FLATLLVVTIALCASQRNGYRRQLRAAKVNIFRGHSSMSLQDAQEPATRVPNTNKHSV------Q 1894
            .:..|..:.:...:...:|....:|.|..:|     .:|:.|..:......|...::.      :
  Fly  2096 EVKDLYRLFVEAKSMLYDGMNSNVRRAVTSI-----DISVLDVNDNCPLFVNMPYYATVSIDDPK 2155

  Fly  1895 GSNPIWLKGYDNEWFKSEESGSIGGHDSLDDNFLAVATQDMHETLKGTAKLF---NNSNDLN--R 1954
            |:..:.:|..|   ..|.|:|.:                 .:|..||..:||   ..|.:|:  :
  Fly  2156 GTIIMQVKAID---LDSAENGEV-----------------RYELKKGNGELFKLDRKSGELSIKQ 2200

  Fly  1955 HFNLYNQIDKMT 1966
            |...:|:..::|
  Fly  2201 HVEGHNRNYELT 2212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637 30/117 (26%)
Cadherin_repeat 179..276 CDD:206637 36/99 (36%)
Cadherin_repeat 287..388 CDD:206637 33/104 (32%)
Cadherin_repeat 397..506 CDD:206637 30/176 (17%)
Cadherin_repeat 514..617 CDD:206637 24/103 (23%)
Cadherin_repeat 625..742 CDD:206637 37/117 (32%)
Cadherin_repeat 751..853 CDD:206637 30/103 (29%)
Cadherin_repeat 865..976 CDD:206637 30/117 (26%)
Cadherin_repeat 985..1080 CDD:206637 31/98 (32%)
Cadherin_repeat 1090..1191 CDD:206637 27/100 (27%)
CA 1221..1302 CDD:214520 26/81 (32%)
Cadherin_repeat 1312..1409 CDD:206637 24/96 (25%)
Cadherin_repeat 1418..>1502 CDD:206637 23/85 (27%)
Cadherin_repeat 1617..1710 CDD:206637 26/110 (24%)
kugNP_001027138.2 Cadherin_repeat 66..178 CDD:206637
Cadherin_repeat 187..285 CDD:206637 1/10 (10%)
E_set 309..390 CDD:298831 22/84 (26%)
Cadherin_repeat 404..503 CDD:206637 36/103 (35%)
Cadherin_repeat 513..609 CDD:206637 34/105 (32%)
Cadherin_repeat 622..708 CDD:206637 13/87 (15%)
Cadherin_repeat 776..873 CDD:206637 24/103 (23%)
Cadherin_repeat 883..976 CDD:206637 37/114 (32%)
Cadherin_repeat 984..1082 CDD:206637 32/106 (30%)
Cadherin_repeat 1092..1189 CDD:206637 30/113 (27%)
Cadherin_repeat 1197..1295 CDD:206637 31/99 (31%)
Cadherin_repeat 1303..1386 CDD:206637 23/88 (26%)
Cadherin_repeat 1413..1502 CDD:206637 30/99 (30%)
Cadherin_repeat 1510..1608 CDD:206637 25/101 (25%)
Cadherin_repeat 1621..1713 CDD:206637 25/107 (23%)
Cadherin_repeat 1724..1811 CDD:206637 18/93 (19%)
Cadherin_repeat 1819..1927 CDD:206637 28/129 (22%)
Cadherin_repeat 1948..2030 CDD:206637 14/93 (15%)
Cadherin_repeat 2037..2136 CDD:206637 13/103 (13%)
Cadherin_repeat 2144..2235 CDD:206637 16/89 (18%)
Cadherin_repeat 2246..2336 CDD:206637
Cadherin_repeat 2345..2445 CDD:206637
Cadherin_repeat 2453..2545 CDD:206637
Cadherin_repeat 2555..>2633 CDD:206637
Cadherin_repeat 2658..2759 CDD:206637
Cadherin_repeat 2774..2856 CDD:206637
Cadherin_repeat 2865..2963 CDD:206637
Cadherin_repeat 2974..3063 CDD:206637
Cadherin_repeat 3072..3165 CDD:206637
Cadherin_repeat 3173..3269 CDD:206637
Cadherin_repeat 3277..3374 CDD:206637
Cadherin_repeat 3383..3479 CDD:206637
Cadherin_repeat 3488..3579 CDD:206637
Cadherin_repeat 3590..3681 CDD:206637
EGF_CA 3866..3903 CDD:238011
Laminin_G_2 3953..4077 CDD:280389
EGF_CA <4121..4150 CDD:238011
EGF_CA 4152..4189 CDD:238011
EGF_CA 4195..4225 CDD:238011
EGF_CA 4227..4262 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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