DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad88C and Fat4

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:XP_006232354.2 Gene:Fat4 / 310341 RGDID:1564291 Length:4981 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637
Cadherin_repeat 179..276 CDD:206637
Cadherin_repeat 287..388 CDD:206637
Cadherin_repeat 397..506 CDD:206637
Cadherin_repeat 514..617 CDD:206637
Cadherin_repeat 625..742 CDD:206637
Cadherin_repeat 751..853 CDD:206637
Cadherin_repeat 865..976 CDD:206637
Cadherin_repeat 985..1080 CDD:206637
Cadherin_repeat 1090..1191 CDD:206637
CA 1221..1302 CDD:214520
Cadherin_repeat 1312..1409 CDD:206637
Cadherin_repeat 1418..>1502 CDD:206637
Cadherin_repeat 1617..1710 CDD:206637
Fat4XP_006232354.2 Cadherin_repeat 48..131 CDD:206637
Cadherin_repeat 139..246 CDD:206637
Cadherin_repeat 254..349 CDD:206637
Cadherin_repeat 364..471 CDD:206637
Cadherin_repeat 479..577 CDD:206637
Cadherin_repeat 588..685 CDD:206637
Cadherin_repeat 693..789 CDD:206637
Cadherin_repeat 798..889 CDD:206637
Cadherin_repeat 904..992 CDD:206637
Cadherin_repeat 1000..1096 CDD:206637
Cadherin_repeat 1105..1206 CDD:206637
Cadherin_repeat 1215..1311 CDD:206637
Cadherin_repeat 1321..1416 CDD:206637
Cadherin_repeat 1428..1525 CDD:206637
Cadherin_repeat 1540..1622 CDD:206637
Cadherin_repeat 1634..1736 CDD:206637
Cadherin_repeat 1747..1837 CDD:206637
Cadherin_repeat 1845..1940 CDD:206637
Cadherin_repeat 1948..2047 CDD:206637
Cadherin_repeat 2057..2150 CDD:206637
Cadherin_repeat 2159..2254 CDD:206637
Cadherin_repeat 2263..2360 CDD:206637
Cadherin_repeat 2369..>2443 CDD:206637
Cadherin_repeat 2472..2559 CDD:206637
Cadherin_repeat 2573..2667 CDD:206637
Cadherin_repeat 2675..2771 CDD:206637
Cadherin_repeat 2778..2870 CDD:206637
Cadherin_repeat 2878..2981 CDD:206637
Cadherin_repeat 2990..3085 CDD:206637
Cadherin_repeat 3095..3192 CDD:206637
Cadherin_repeat 3200..3295 CDD:206637
Cadherin_repeat 3305..3402 CDD:206637
Cadherin_repeat 3410..3508 CDD:206637
Cadherin_repeat 3516..3612 CDD:206637
EGF_CA 3804..3862 CDD:238011
EGF_CA 3864..3900 CDD:238011
EGF_CA 3902..3938 CDD:238011
EGF_CA 3941..3976 CDD:238011
LamG 3979..4142 CDD:238058
EGF_CA 4168..4200 CDD:238011
Laminin_G_2 4252..4375 CDD:396680
EGF_CA 4430..4464 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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