DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cad88C and Fat3

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:XP_011240845.1 Gene:Fat3 / 270120 MGIID:2444314 Length:4611 Species:Mus musculus


Alignment Length:2442 Identity:553/2442 - (22%)
Similarity:906/2442 - (37%) Gaps:718/2442 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PRFAIDGQSEIVLRLKESPETKVGTLIYTLKGYDPD---NDPLTFGKRNSHDSEIIRIENTGGNE 120
            |.|.....|::.::    .:..|||.|..:|.||.|   |..:.|...:.:......|:...| :
Mouse   723 PHFDKSFPSDVAVK----EDMLVGTNILKIKAYDADSGFNGKVLFTISDGNTDSCFNIDMETG-Q 782

  Fly   121 AKIFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFLLL---VEDINDNVPTFLPYQNAIEIP 182
            .|:.:  .:|||..|.|.:.:|:.|......:    |:.||   |||.|||.|.||....::.|.
Mouse   783 LKVLM--PMDREHTDLYVLNITIYDLGKPQKS----SWRLLTVNVEDANDNNPVFLQDSYSVSIL 841

  Fly   183 EGSAPGV-VSTLEATDADEGAYGQVVYYLQELDGDNDVFSIATHQGKGILRLQKELDYERKSLYQ 246
            |.|:.|. :..:||.|.|.|:.|:|:|.:.     .|......:...||:.:..:||.|.|:.|.
Mouse   842 ESSSIGTEIIQVEARDKDLGSNGEVMYSVL-----TDTHQFIINSSTGIVYIADQLDRESKANYS 901

  Fly   247 LRVLAIDRANQGPINTGTAAILVKVKDLEDQPPEFVEVQAVARIAEDAPVGTKVLRVRAIDGDRG 311
            |::.|.|:|..|........:.:.:.|:.|..|.|:......::.||.||||.:..:...|.|.|
Mouse   902 LKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYSVKVLEDLPVGTVIAWLETQDPDLG 966

  Fly   312 INNPIAYSL--EANDLFDINPHTGIVHTLTKLDREEQSDQVNGAHILRISATELSKSNTQMAPTT 374
            :...:.|||  :.|..|:::..:|.:....:||.|:|.     .:.|.:.|.:..:..:..:.:.
Mouse   967 LGGQVRYSLVNDYNGRFEVDKASGAIRLSKELDYEKQQ-----FYNLTVRAKDKGRPVSLSSVSF 1026

  Fly   375 VRTEVTVIVSDVNDEI--PTFGETVYRCEVNENAQTNTPLNFIDEEVQNVVFDHDEGNNGTFRLF 437
            |..||.    |||:.:  |.|.:......|.||::..|.:      :|....|.|.|.:|..:..
Mouse  1027 VEVEVV----DVNENLHTPYFPDFAVVGSVKENSRIGTSV------LQVTAHDEDSGRDGEIQYS 1081

  Fly   438 LDPPNDL--FEIVPELAVNEANFMLRVKNSKSLDFEQFTEVNFTIFAREVDEPSRWSSAHVQIFI 500
            :...:.|  |.|..|..|        :..:.|||.|.......|::|.:......:|:..|.|.:
Mouse  1082 IRDGSGLGRFNIDDESGV--------ITAADSLDRETTASYWLTVYATDRGVVPLYSTIEVYIEV 1138

  Fly   501 RDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTMGIRYTNLRGGIAHLLNLNPI 565
            .|.|||.|..|:.||...|:|||.:|..:..:||.|.|||....:..|.|:  |...:...:|..
Mouse  1139 EDVNDNAPLTSEPIYYPVVMENSPKDVSVIQIQAEDPDSGSNEKLTYRITS--GNPQNFFAINIK 1201

  Fly   566 TGVITIKQAGGTAFDREIISRHYLTVEAIDNAGQGNRNTAQIIVDILDVNDNAPTFPQRQYETKL 630
            ||:||   ......|||..:.|:|.|...|......::|..::|.:||.|||.|.||::.|:.||
Mouse  1202 TGLIT---TTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNRPQFPEKVYQIKL 1263

  Fly   631 LENQAEFETPLQLEARDADLNGTENSQVTYEIVEGLYRSNFTIDPQSGLL--------------- 680
            .|...:........|...|.:...|::::|.||:|.....|.|||::|::               
Mouse  1264 PERDRKKRGEPIYRAFAFDKDEGPNAEISYSIVDGNDDGKFFIDPKTGMVSSRKQFTAGSYDILT 1328

  Fly   681 -------RP-------VH----------------------------------------------- 684
                   ||       :|                                               
Mouse  1329 IKAVDNGRPQKSSTARLHIEWIKKPPPSPIPLTFDEPFYNFTVMESDKVTEIVGVVSVQPANTPL 1393

  Fly   685 ----------------------------------SFDFE------------------------EL 691
                                              |||.|                        |:
Mouse  1394 WFDIVGGKHAREMFYILQTACGQNCSTEGGNFDSSFDAEKGVGTIVIAKPLDAEQRSVYNMSVEV 1458

  Fly   692 VDGSS------------------------------------------------------------ 696
            .||::                                                            
Mouse  1459 TDGTNIAVTQVFIKVLDNNDNGPEFSQPHYDVTISEDVLPDTEILQIEATDRDEKHKLSYTIHSS 1523

  Fly   697 --------RRSDPYTGGSFSIREID--------LLVRARDSGIPMLSTVVPVLIYVQDVNDNAPI 745
                    .|.||.||..::...:|        |.:..||...|....:..|::.|:|.||::|.
Mouse  1524 IDAVSMRKFRMDPSTGVLYTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPY 1588

  Fly   746 FQQSFYAKTVPEDLPGGSSVLQVTAIDRDGSAPNNVVVYRIQTG-AGDKFIINSETGVISVAHGA 809
            |....|..:|.|....||.||||||:|:| ...|..::|.|:.| .|:.|.|....|:|:::.  
Mouse  1589 FTNPLYEASVFESAALGSVVLQVTALDKD-KGENAELIYSIEAGNTGNTFKIEPVLGIITISK-- 1650

  Fly   810 NLDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVNNKPPVL--KEMPALQILENTP 872
              :||:  :....:.|||...|  .|:..:..|..|.|||...:|..|..  |:..| ::.||..
Mouse  1651 --EPDM--AAMGQFVLSVKVTD--QGSPPMSATAIVRISISMSDNSHPKFTHKDYQA-EVNENVD 1708

  Fly   873 VGTLVYRIQATDLDHKAILRYKLNPEHCEGRTEEGALVKSSEYDFLGAFEVDSIEGTLKVVKLLD 937
            :||.|..|.|..   ::.|.|:               ||....:  |.|.::...|.:...:.||
Mouse  1709 IGTSVILISAIS---QSTLIYE---------------VKDGNIN--GVFTINPYSGVITTRRALD 1753

  Fly   938 RERVEHIKLAITVEDLAAAKGRQIAEGFLSIQVLDENDNNPKFRLPFYRQSITE----NSI---- 994
            .|.....:|.|...::|.    ..:...:|:|::|||||.|.|....|..|::|    |||    
Mouse  1754 YEHTSSYQLIIQATNMAG----MASNATISVQIVDENDNPPVFLFSQYSGSLSEAAPINSIVRSL 1814

  Fly   995 -NGAMIVNVLASDVDKNRTITYALEGNPTYRSLMHLDPQTGEIVVASKIDHEQHQWLNFSVRATD 1058
             |..:::....:|.::|..:.|.:. ..|.:....:|..||.|...:.:|||.....:|.|...|
Mouse  1815 DNSPLVIRATDADSNQNALLVYQIV-ESTAKKFFTVDSSTGAIRTIANLDHEAIAHFHFHVHVRD 1878

  Fly  1059 SGIP--ARSSLVDVYITVLDENDNNPYFVGGSKNYTISENAAPGTRVATLQAGDADSGDFGKITF 1121
            ||.|  ...|.|:|.|.|.|.|||.|.|........:......|..|..:.|.|.||....::|:
Mouse  1879 SGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVLLLPTYIGVEVLKVSATDPDSEVPPELTY 1943

  Fly  1122 -LMDRISSQGKFTIDADTGVLTVADRLDRESKDSYNLVIEAWDN--YQFGFL------AGESRNA 1177
             ||:  .|...|.:|.:|||||:.:  :..|||.|.|::...|.  |....:      |.:|...
Mouse  1944 SLME--GSVDNFLMDPNTGVLTIKN--NNLSKDHYMLIVRVSDGKFYSTAMVTVMVKEAMDSGLH 2004

  Fly  1178 FKQVF--ISILDENDNPPEVDL----------PMSCVLIT------------------------- 1205
            |.|.|  .||.:.:.|..:|.:          |:...::.                         
Mouse  2005 FTQSFYSTSISENSTNITKVAIVNAVGNRLNEPLKYSILNPGNKFKIKSTSGVIQTTGVPFDREE 2069

  Fly  1206 -EYHEL---------HERVASIVGK----DADDPT---------------TPNGRLDFAITRGNK 1241
             |.:||         |.|||.:|.:    |.:|.:               ...|.|.:.:|..:|
Mouse  2070 QELYELVVEASRELDHLRVARVVVRVNIEDVNDNSPVFVGLPYYAAVQVDAEPGTLIYRVTAIDK 2134

  Fly  1242 D---------------GMFELRQIDAWNAQIFASKSLRNRYGN--YSLTITTRDMG--------- 1280
            |               |.||   |:..:..:...::..:...|  |.:||..:|.|         
Mouse  2135 DKGANGEVTYVLQDDYGHFE---INPNSGNVILREAFNSDLSNIDYGVTILAKDGGNPSLSTFVE 2196

  Fly  1281 LPANIVHN--------------------------------------------------------- 1288
            ||..||:.                                                         
Mouse  2197 LPITIVNKAMPVFDKPFYTASINEDITMNTPILSINATSPEGQGIIYLIIDGDPFQQFNIDFDTG 2261

  Fly  1289 ---------------------------------TLDICVSDFNDHAPVFVRPLHNTTVRIPENAT 1320
                                             |:|:.|.|.||:.|||.:|.:|||  :.|::.
Mouse  2262 VLKVISPLDYEVTSVYKLTVRASDALTGARAEVTVDLLVDDINDNPPVFDQPTYNTT--LSESSL 2324

  Fly  1321 VGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKMFEVDGSTGELFLKEQLNREKQKIHEIRIEA 1385
            :||.:||..::|.|.|.|.||||::..|...|...|.:|.|:|.:.....|:.|..:...:::.|
Mouse  2325 IGTPVLQLVSTDADSGNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVTA 2389

  Fly  1386 YDQGLPTSLSSDLDLTIYVRNVNDYEPQF-------MVNEIS-----VNFTEHSDPGSERIKLPD 1438
            .|.|.| ||||::.:.||:.:|||..|.|       .|:|::     |...:.||        .|
Mouse  2390 TDNGFP-SLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGHFVTCVQASD--------AD 2445

  Fly  1439 TIDKDQLELDDPNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREVIANFTLYVRATENC 1503
            :.|.|:||            |.|::||:...|.:|.::.:||:.....:.:...::|        
Mouse  2446 SSDLDRLE------------YSILSGNDRASFLMDSKSGVLTLSSHRKQRMEPLYSL-------- 2490

  Fly  1504 RNDSISGG--EKRRRMGIEINNRLGGIVHNQQFGYDRF-KHSRQ----------LRSTESN--EY 1553
             |.|:|.|  ....::.|.:   ||..:::..|....: ...|:          :|:|:.:  .|
Mouse  2491 -NVSVSDGLFTSTAQVHIRV---LGANLYSPAFSQSTYVAEVRENAASGTKVIHVRATDGDPGTY 2551

  Fly  1554 GPEDAELLSYEAYDSSQEDPTGGLATTHPELD---------------------STVIKVKVRVLD 1597
            |.....:::..|.|....|..|.:.||. .||                     :|...|:|.|:|
Mouse  2552 GQVSYSIINDFAKDRFLIDSNGQIITTE-RLDRENPLEGDISIYLRALDGGGRTTFCTVRVIVVD 2615

  Fly  1598 INDNPPRFRSKIFTGGITTNADFGLKFMRVEATDADEGDNGRIGYYQVGEIRQTLSEGLENVRKA 1662
            .|||.|:|.:..:...:..:...|....:|:|.|.|:|.|.||.|....|...::::.||     
Mouse  2616 ENDNAPQFMTVEYRASVRADVGRGHLVTQVQALDPDDGANSRITYSLYSEASVSVADLLE----- 2675

  Fly  1663 PFLLDQETGEVQLNFDPQKG---MKGYFD--------FVVLANDTSGMKDVAH----VFIYLLRE 1712
                          .||..|   .||.|:        |.|.|.|  |...|.|    |:|::|..
Mouse  2676 --------------IDPDNGWMVTKGNFNQLRNTVLSFFVKAVD--GGIPVRHSLIPVYIHVLPP 2724

  Fly  1713 D------QKVRFVFRLQPD-ELRSRVDSFRDTLSN--ITESIVNIDEIKVHENKDGSVDKTKTDL 1768
            :      .:.::.|.:..| .:.|.||:.| .|.|  :..|:||.:  :...||:|         
Mouse  2725 ETFLPSFTQSQYSFTITEDTSIGSTVDTLR-ILPNQSVRFSMVNGE--RPENNKEG--------- 2777

  Fly  1769 YMHLVEREDNSI-------YEVSEVLKLIDSHIESLNGL-FKELNVLDTQAAEAQLLTAGPSRGP 1825
             :.::|:|..:|       :|||...     |.:....: ..:::::.|...:.::|....:: |
Mouse  2778 -VFIIEQETGAIKLDKRLDHEVSPAF-----HFKVAATIPLDKVDIVFTVDVDVKVLDLNDNK-P 2835

  Fly  1826 LFVWLIFTNLFLATLLVVT-IALCASQRNGYRRQLRAAKVN-------IFRGHSSMSLQDAQEPA 1882
            :|....:..:.:..:.|.| :|           |:||..::       .:..||...|:...|..
Mouse  2836 VFETSTYETIIMEGMPVGTKLA-----------QVRAIDMDWGANGQVTYSLHSDSHLEKVIEAF 2889

  Fly  1883 TRVPNTNKHSVQGSNPIW---LKGYDNEWFKSEE----SGSIGGHDSLDDNFL-AVATQDM---- 1935
            ....||.          |   ||..|:|...:..    :..:|...||....| :|...|:    
Mouse  2890 NIDSNTG----------WISTLKDLDHETDPAFSFFVVASDLGEAFSLSSMALVSVKVTDINDNA 2944

  Fly  1936 ----HETLKGTAKLFNNSNDLNRHFNLYNQIDKMTNN 1968
                ||..:|..|   .|:.......:.:.:||.|:|
Mouse  2945 PVFAHEVYRGNVK---ESDPPGEVVAVLSTLDKDTSN 2978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637 27/97 (28%)
Cadherin_repeat 179..276 CDD:206637 26/97 (27%)
Cadherin_repeat 287..388 CDD:206637 26/102 (25%)
Cadherin_repeat 397..506 CDD:206637 25/110 (23%)
Cadherin_repeat 514..617 CDD:206637 33/102 (32%)
Cadherin_repeat 625..742 CDD:206637 40/326 (12%)
Cadherin_repeat 751..853 CDD:206637 34/102 (33%)
Cadherin_repeat 865..976 CDD:206637 25/110 (23%)
Cadherin_repeat 985..1080 CDD:206637 31/105 (30%)
Cadherin_repeat 1090..1191 CDD:206637 31/111 (28%)
CA 1221..1302 CDD:214520 27/211 (13%)
Cadherin_repeat 1312..1409 CDD:206637 33/96 (34%)
Cadherin_repeat 1418..>1502 CDD:206637 18/88 (20%)
Cadherin_repeat 1617..1710 CDD:206637 28/107 (26%)
Fat3XP_011240845.1 Cadherin_repeat 47..153 CDD:206637
Cadherin_repeat 162..262 CDD:206637
CA 286..373 CDD:214520
Cadherin_repeat 380..468 CDD:206637
Cadherin_repeat 477..574 CDD:206637
Cadherin_repeat 592..672 CDD:206637
Cadherin_repeat 733..827 CDD:206637 27/104 (26%)
Cadherin_repeat 835..931 CDD:206637 26/100 (26%)
Cadherin_repeat 940..1018 CDD:206637 21/82 (26%)
Cadherin_repeat 1049..1144 CDD:206637 25/108 (23%)
Cadherin_repeat 1152..1250 CDD:206637 33/102 (32%)
Cadherin_repeat 1258..1348 CDD:206637 19/89 (21%)
Cadherin_repeat 1367..1479 CDD:206637 7/111 (6%)
Cadherin_repeat 1487..1585 CDD:206637 14/97 (14%)
Cadherin_repeat 1594..1684 CDD:206637 32/98 (33%)
Cadherin_repeat 1699..1788 CDD:206637 26/113 (23%)
Cadherin_repeat 1796..1902 CDD:206637 31/106 (29%)
Cadherin_repeat 1921..2000 CDD:206637 25/82 (30%)
Cadherin_repeat 2010..2103 CDD:206637 14/92 (15%)
Cadherin_repeat 2111..2202 CDD:206637 17/93 (18%)
Cadherin_repeat 2214..2306 CDD:206637 5/91 (5%)
Cadherin_repeat 2314..2413 CDD:206637 36/101 (36%)
Cadherin_repeat 2421..2513 CDD:206637 26/123 (21%)
Cadherin_repeat 2523..2619 CDD:206637 19/96 (20%)
Cadherin_repeat 2627..2722 CDD:206637 28/115 (24%)
Cadherin_repeat 2735..2833 CDD:206637 23/115 (20%)
Cadherin_repeat 2841..2943 CDD:206637 23/122 (19%)
Cadherin_repeat 2951..3048 CDD:206637 7/31 (23%)
Cadherin_repeat 3057..3150 CDD:206637
Cadherin_repeat 3158..3255 CDD:206637
Cadherin_repeat 3264..3360 CDD:206637
Cadherin_repeat 3368..3465 CDD:206637
Cadherin_repeat 3474..3565 CDD:206637
Cadherin_repeat 3584..3661 CDD:206637
Laminin_G_2 3888..4014 CDD:366983
EGF_CA 4046..4081 CDD:238011
EGF_CA 4080..4119 CDD:238011
EGF_CA 4121..4156 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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