| Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_056484.2 | Gene: | PCDHB5 / 26167 | HGNCID: | 8690 | Length: | 795 | Species: | Homo sapiens |
| Alignment Length: | 736 | Identity: | 211/736 - (28%) |
|---|---|---|---|
| Similarity: | 316/736 - (42%) | Gaps: | 139/736 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 506 NFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTMGIR--YTNLRGGIAHLLNLNPITGV 568
Fly 569 ITIKQAGGTAFDREIIS-------RHYLTVEAIDNAGQGNRNTAQIIVDILDVNDNAPTFPQRQY 626
Fly 627 ETKLLEN-QAEFETPLQLEARDADLNGTENSQVTYEIVEGLYRSNFTIDPQSGLLRPVHS----F 686
Fly 687 DFEELV--DGSSRRSDPYTGGSFSIREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQS 749
Fly 750 FYAKTVPEDLPGGSSVLQVTAIDRDGSAPNNVVVYRIQTGAGDK----FIINSETGVISVAHGAN 810
Fly 811 LDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVNNKPPVLKEMPALQ--ILENTPV 873
Fly 874 GTLVYRIQATDLDHKAILRYKLNPEHCEGRTEEGALVKSSEYD--FLGAFEVDSIEGTLK----- 931
Fly 932 -VVKLLDRERVEHIKLAITVEDLAAAKGRQIAEGFLSIQVLDENDNNPKFRLPFYRQSITENSIN 995
Fly 996 GAMIVNVLASDVDK--NRTITYAL--EGNPTYR--SLMHLDPQTGEIVVASKIDHEQHQWLNFSV 1054
Fly 1055 RATDSGIPARSSLVDVYITVLDENDNNPYFV----GGSKNYT--ISENAAPGTRVATLQAGDADS 1113
Fly 1114 GDFGKITFLMDRISSQGKFTIDADTGVLTVADRLDRESKDSYNLVIEAWDNYQFGFLAGE-SRNA 1177
Fly 1178 FKQVFISILDENDNPPEVDLP 1198 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | |
| Cadherin_repeat | 179..276 | CDD:206637 | |||
| Cadherin_repeat | 287..388 | CDD:206637 | |||
| Cadherin_repeat | 397..506 | CDD:206637 | 211/736 (29%) | ||
| Cadherin_repeat | 514..617 | CDD:206637 | 23/111 (21%) | ||
| Cadherin_repeat | 625..742 | CDD:206637 | 32/123 (26%) | ||
| Cadherin_repeat | 751..853 | CDD:206637 | 34/105 (32%) | ||
| Cadherin_repeat | 865..976 | CDD:206637 | 29/120 (24%) | ||
| Cadherin_repeat | 985..1080 | CDD:206637 | 36/100 (36%) | ||
| Cadherin_repeat | 1090..1191 | CDD:206637 | 25/103 (24%) | ||
| CA | 1221..1302 | CDD:214520 | |||
| Cadherin_repeat | 1312..1409 | CDD:206637 | |||
| Cadherin_repeat | 1418..>1502 | CDD:206637 | |||
| Cadherin_repeat | 1617..1710 | CDD:206637 | |||
| PCDHB5 | NP_056484.2 | Cadherin_2 | 30..112 | CDD:311943 | 20/98 (20%) |
| Cadherin_repeat | 140..238 | CDD:206637 | 32/120 (27%) | ||
| Cadherin_repeat | 247..342 | CDD:206637 | 36/107 (34%) | ||
| Cadherin_repeat | 356..446 | CDD:206637 | 28/115 (24%) | ||
| Cadherin_repeat | 454..556 | CDD:206637 | 36/101 (36%) | ||
| Cadherin_repeat | 575..663 | CDD:206637 | 23/94 (24%) | ||
| Cadherin_C_2 | 684..767 | CDD:318652 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S7815 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.950 | |||||