DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cad88C and Dchs1

DIOPT Version :9

Sequence 1:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster
Sequence 2:XP_006507718.1 Gene:Dchs1 / 233651 MGIID:2685011 Length:3431 Species:Mus musculus


Alignment Length:1911 Identity:496/1911 - (25%)
Similarity:750/1911 - (39%) Gaps:429/1911 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SNRPPRFAIDGQSEIVLRLKESPETKVGTLIYTLKGYDPDNDPL-TFGKRNSHD--SEIIRIENT 116
            ::..|.|.   |:...|::.|  .|.:||........|.|...| |.|...|.|  .|..|:|..
Mouse   271 NDHAPAFP---QARAALQIPE--HTALGTRYPLEPARDADAGRLGTQGYALSGDGAGETFRLETR 330

  Fly   117 ----GGNEAKIFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFL-LLVEDINDNVPTFLPYQ 176
                |....::.:|.|||||.:..|.:.|...|.......  .|:.| :.:.||||:.|.|...:
Mouse   331 PGPGGAPVPELVIAGELDRENRSHYMLQLEAYDGGSPPRR--AQALLDVTLLDINDHAPAFNQSR 393

  Fly   177 NAIEIPEGSAPG-VVSTLEATDADEGAYGQVVYYLQELDGDND-VFSIATHQGKGILRLQKELDY 239
            ....:.|..||| .|..:.|:|||.||.|.|.|.:.....:.| .|||..|  .|.|||::.||:
Mouse   394 YHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFSIDAH--TGFLRLERPLDF 456

  Fly   240 ERKSLYQLRVLAIDRANQGPINTGTAAILVKVKDLEDQPPE----FVEVQAVARIAEDAPVGTKV 300
            |::.:::|.|.|.|......:  |:|.:.|.|:|..|..|.    |:......|::|.||.|..|
Mouse   457 EQRRVHELVVQARDGGAHPEL--GSAFVTVHVRDANDNQPSMTVIFLSADGSPRVSEAAPPGQLV 519

  Fly   301 LRVRAIDGDRGINNPIAYSLEAND-LFDINPHTGIVHTL---TKLDREEQSDQVNGAHILRISAT 361
            .|:...|.|.|....:..|||..: .|.::....:::.:   .:|||||: |..|    ||::||
Mouse   520 ARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCVARRLDREER-DVYN----LRVTAT 579

  Fly   362 ELSKSNTQMAPTTVRTEVTVIVSDVNDEIPTFGETVYRCEVNENAQTNTPLNFIDEEVQNVVFDH 426
            :     :...|........:.|:||||..|.|...:||.|  ...:...|.:|:   |:....|.
Mouse   580 D-----SGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPE--PLPEVALPGSFV---VRVTARDP 634

  Fly   427 DEGNNGTFRLFLDPPNDL--FEIVPELAVNEANFMLRVKNSKSLDFEQFTEVNFTIFAREVDEPS 489
            |:|.||.....|.|....  |.|.|...:        :..:.:||:|...:....:.|.:...|.
Mouse   635 DQGTNGQITYSLAPGTHTHWFSIDPTSGI--------ITTAATLDYELEPQPQLIVVATDGGLPP 691

  Fly   490 RWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTMGIRYTNLRG 554
            ..|||.|.:.::|.|||.|:|.:|.||||:.|.::..|....|.|.|.|||.:|.:..   :|..
Mouse   692 LVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGLLSY---SLGA 753

  Fly   555 GI-----------AHLLNLNPITGVITI-KQAGGTAFDREIISRHYLTVEAIDNAGQGNRNTAQI 607
            |:           ||   ...:....|: :..|.::||        .||.|||  |.|.::...:
Mouse   754 GLGASGSPPFRIDAH---SGDVCTTRTLDRDQGPSSFD--------FTVTAID--GGGLKSMVYV 805

  Fly   608 IVDILDVNDNAPTFPQRQYETKLLENQAEFETPLQLEARDADLNGTENSQVTYEIVEGLYRSNFT 672
            .|.:.|.|||.|.|..|:|...|..........|::.|.|.|..  .:.:::|.|:.|.....|.
Mouse   806 KVFVADENDNPPQFYPREYAASLSAQSTPGTAVLRVHAHDPDQG--PHGRLSYHILAGNSPPLFA 868

  Fly   673 IDPQSGLL----------------------------RPVHSFDF--------------------- 688
            :|..||||                            .|:...:.                     
Mouse   869 LDAHSGLLTVAWPLGRRANSVVQLEIGAQDGGGLQAEPIARVNISIVPGTPTPPIFEQLQYVFSV 933

  Fly   689 -EELVDGSS----------RRSDPYT----GGS----FSI--------------RE-----IDLL 715
             |::..|:|          .|..|.|    ||.    ||:              ||     ::|.
Mouse   934 PEDVAPGTSVGIIQAHNPPGRLGPVTLTLSGGDPRGLFSLDSPSGLLKTLRPLDRELLGPVLELE 998

  Fly   716 VRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPEDLPGGSSVLQVTAIDRDGSAPNN 780
            ||| .||.|.:..|..:.:.:.|||||:|.|........:|::...|:.:..:.|:|.|..| |:
Mouse   999 VRA-GSGTPPVFAVARIRVLLDDVNDNSPAFPAPEDTVLLPQNTAPGTPIYTLRALDPDSGA-NS 1061

  Fly   781 VVVYRIQTGAGDKFIINSETGVISVAHGANLDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCTV 845
            .:.:.:..|....|.::..||     |...:.| |.......:.|.|.|.||  |:....:...:
Mouse  1062 RITFNLLAGGDGLFTVDPTTG-----HVRLMGP-LGPPGGPAHELEVEARDG--GSPPRTSHFRL 1118

  Fly   846 NISIQDVN--------NKPPVLKEMPALQILENTPVGTLVYRIQATDLDHKAILRYKLNPEHCEG 902
            .:.|||:.        :.|....::|:     .|..||.:.::||...|...: .|.|       
Mouse  1119 RVVIQDLGIHGLAPRFDSPTYRVDLPS-----GTTTGTQILQVQAQAPDGSPV-TYHL------- 1170

  Fly   903 RTEEGALVKSSEYDFLGAFEVDSIEGTLKVVKLLDRERVEHIKLAI-TVEDLAAAKGRQIAEGFL 966
             ..:||   ||      .|.::|..|.|.|...||||..|...|.: .|....|..|:|.....:
Mouse  1171 -AADGA---SS------PFGLESQSGWLWVRTALDRESQELYTLKVMAVSGSKAELGQQTGTATV 1225

  Fly   967 SIQVLDENDNNPKFRLPFYRQSITENSINGAMIVNVLASDVDK--NRTITYALEGNPTYRSLMHL 1029
            .:.:|::||::|:........::.||...|..:..|.|:|.|.  |..:||:|:..........:
Mouse  1226 RVIILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKAFRI 1290

  Fly  1030 DPQTGEIVVASKIDHEQHQWLNFSVRATDSGIPARSSLVDVYITVLDENDNNPYFV------GGS 1088
            .|||||:.....:|.||.......|:..|.|.|.||:...|::.|||.|||:|.|:      ||.
Mouse  1291 HPQTGEVTTLQTLDREQQSSFQLLVQVQDGGSPPRSATGTVHVAVLDLNDNSPTFLQASGAAGGG 1355

  Fly  1089 KNYTISENAAPGTRVATLQAGDADSGDFGKITFLMDRISSQGKFTIDADTGVLTVADRLDRESKD 1153
            ....:.:...|||.|.||||.|.|.|:.|.|.:.:....|: .|::...||.|..|..|.|..:.
Mouse  1356 LPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSE-LFSLHPHTGELHTAASLVRAERP 1419

  Fly  1154 SYNLVIEAWDNYQFGFLAGESRNAFKQVFISILDEN---DNPPEVDLPMSC---VLITEYHELHE 1212
            .|.|.:.|.|.      ....|:|..|:.:.:|...   ::|..::...:.   |::|.......
Mouse  1420 HYVLTLSAHDQ------GSPPRSASLQLLVQVLPSTRVVESPDLIEADSAATVPVVLTVTAAEGL 1478

  Fly  1213 RVASIVGKDADDPTTPNGRLDFAITRG-NKDGMFEL----------RQID-----AWNAQIFASK 1261
            |..|::|..|.......|.|.:.:..| :.:|.|.|          |.:|     ||.|....::
Mouse  1479 RPGSLLGSVAPQEPASVGVLTYTLVGGADPEGTFALDSASGRLYLARPLDFEAGPAWRALTVRAE 1543

  Fly  1262 ------------SLRNRYGNYSLTITTRD---MGLPAN--------------------------- 1284
                        .:|.:..|.......||   :.||.|                           
Mouse  1544 GPGGAGARLLRVQVRVQDENEHAPTFARDPLALALPENPDPGATLYTFRASDADGPGPNSEVRYR 1608

  Fly  1285 ------------------------------------IVHNT---------------LDICVSDFN 1298
                                                :|..|               ..:.|:|.|
Mouse  1609 LLRQEPPVPALRLDARTGALSAPRGLDRETTPALLLLVEATDRPANASRRRAARVSARVFVTDEN 1673

  Fly  1299 DHAPVFVRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKMFEVDGSTG 1363
            |:||||..|   :.||:||:...|...|...|.|.|:|:.|.|.|||   ..|....|.:..:||
Mouse  1674 DNAPVFASP---SRVRLPEDQPPGPAALHVVARDPDLGEAARVSYRL---AAGGDGHFRLHATTG 1732

  Fly  1364 ELFLKEQLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISVNFTEHSD 1428
            .|.:...|:||::..|.:.:.|.|.|.|...|:.| ||:.|.:|||..|.|...|.:|...|:|.
Mouse  1733 ALSVVRPLDREQRAEHVLTVVALDHGSPPRSSTQL-LTVSVVDVNDEAPAFPQQEYNVILRENSP 1796

  Fly  1429 PGSERIKLPDTIDKDQLELDDPN-DTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREVIAN 1492
            ||:..:.|..|         ||: ....||.|..|:|..   |.|||.|.:||..|.||||....
Mouse  1797 PGTSLLTLKAT---------DPDLGANGQVTYGGVSGES---FSLDPNTGVLTTLRALDREEQEE 1849

  Fly  1493 --FTLY--------------VRATENCRNDSI-------------SGGEKRRRMGIEINNRLGGI 1528
              .|:|              ||.|....||..             .|.:.:....:..::..||:
Mouse  1850 IYLTVYARDRGLPPLLTHITVRVTVEDENDHTPTFGNTHLSLEVPEGQDPQTLTTLRASDPDGGL 1914

  Fly  1529 VHNQQFGY---DRFKHSRQLRSTESNEYG---PEDAEL-----LSYEAYDSSQEDPTGGLATTHP 1582
              |.|..|   |............|.|:|   |.|.|:     |..||.|..|           |
Mouse  1915 --NGQLQYRILDGDSSGAFALDLTSGEFGTMRPLDREVEPAFQLQIEARDGGQ-----------P 1966

  Fly  1583 ELDSTVIKVKVRVLDINDNPPRFRSKIFTGGITTNADFGLKFMRVEATDADEGDNGRIGYYQVGE 1647
            .|.:|:: |.|.|||.||:.|.|....::..:..:|..|...::::|.|.|:|||||:.||    
Mouse  1967 ALSATLL-VTVTVLDANDHAPVFPVPSYSVEVPEDAPVGTLLLQLQAHDPDDGDNGRVMYY---- 2026

  Fly  1648 IRQTLSEGLENVRKAPFLLDQETGEV 1673
                |..|....    |||:..:||:
Mouse  2027 ----LGAGTAGA----FLLEPTSGEL 2044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637 28/99 (28%)
Cadherin_repeat 179..276 CDD:206637 35/98 (36%)
Cadherin_repeat 287..388 CDD:206637 29/104 (28%)
Cadherin_repeat 397..506 CDD:206637 27/110 (25%)
Cadherin_repeat 514..617 CDD:206637 31/114 (27%)
Cadherin_repeat 625..742 CDD:206637 39/203 (19%)
Cadherin_repeat 751..853 CDD:206637 23/101 (23%)
Cadherin_repeat 865..976 CDD:206637 29/111 (26%)
Cadherin_repeat 985..1080 CDD:206637 30/96 (31%)
Cadherin_repeat 1090..1191 CDD:206637 29/103 (28%)
CA 1221..1302 CDD:214520 25/189 (13%)
Cadherin_repeat 1312..1409 CDD:206637 34/96 (35%)
Cadherin_repeat 1418..>1502 CDD:206637 32/100 (32%)
Cadherin_repeat 1617..1710 CDD:206637 19/57 (33%)
Dchs1XP_006507718.1 Cadherin_repeat 183..273 CDD:206637 0/1 (0%)
Cadherin_repeat 284..385 CDD:206637 30/104 (29%)
Cadherin_repeat 394..492 CDD:206637 35/101 (35%)
Cadherin_repeat 508..602 CDD:206637 30/103 (29%)
Cadherin_repeat 616..708 CDD:206637 24/102 (24%)
Cadherin_repeat 717..815 CDD:206637 31/113 (27%)
Cadherin_repeat 823..915 CDD:206637 16/93 (17%)
Cadherin_repeat 928..1024 CDD:206637 23/96 (24%)
Cadherin_repeat 1034..1124 CDD:206637 21/98 (21%)
Cadherin_repeat 1138..1235 CDD:206637 30/119 (25%)
Cadherin_repeat 1248..1341 CDD:206637 30/92 (33%)
Cadherin_repeat 1358..1446 CDD:206637 28/94 (30%)
Cadherin_repeat 1469..1565 CDD:206637 18/95 (19%)
Cadherin_repeat 1578..1675 CDD:206637 8/96 (8%)
Cadherin_repeat 1684..1777 CDD:206637 34/96 (35%)
Cadherin_repeat 1786..1880 CDD:206637 33/105 (31%)
Cadherin_repeat 1890..1984 CDD:206637 27/107 (25%)
Cadherin_repeat 1992..2089 CDD:206637 19/65 (29%)
Cadherin_repeat 2116..2192 CDD:206637
Cadherin_repeat 2207..2300 CDD:206637
Cadherin_repeat 2308..2406 CDD:206637
Cadherin_repeat 2415..2505 CDD:206637
Cadherin_repeat 2514..2611 CDD:206637
Cadherin_repeat 2619..2731 CDD:206637
Cadherin_repeat 2739..2835 CDD:206637
Cadherin_repeat 2845..2941 CDD:206637
Cadherin_repeat 2950..3056 CDD:206637
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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