Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006507718.1 | Gene: | Dchs1 / 233651 | MGIID: | 2685011 | Length: | 3431 | Species: | Mus musculus |
Alignment Length: | 1911 | Identity: | 496/1911 - (25%) |
---|---|---|---|
Similarity: | 750/1911 - (39%) | Gaps: | 429/1911 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 55 SNRPPRFAIDGQSEIVLRLKESPETKVGTLIYTLKGYDPDNDPL-TFGKRNSHD--SEIIRIENT 116
Fly 117 ----GGNEAKIFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFL-LLVEDINDNVPTFLPYQ 176
Fly 177 NAIEIPEGSAPG-VVSTLEATDADEGAYGQVVYYLQELDGDND-VFSIATHQGKGILRLQKELDY 239
Fly 240 ERKSLYQLRVLAIDRANQGPINTGTAAILVKVKDLEDQPPE----FVEVQAVARIAEDAPVGTKV 300
Fly 301 LRVRAIDGDRGINNPIAYSLEAND-LFDINPHTGIVHTL---TKLDREEQSDQVNGAHILRISAT 361
Fly 362 ELSKSNTQMAPTTVRTEVTVIVSDVNDEIPTFGETVYRCEVNENAQTNTPLNFIDEEVQNVVFDH 426
Fly 427 DEGNNGTFRLFLDPPNDL--FEIVPELAVNEANFMLRVKNSKSLDFEQFTEVNFTIFAREVDEPS 489
Fly 490 RWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTMGIRYTNLRG 554
Fly 555 GI-----------AHLLNLNPITGVITI-KQAGGTAFDREIISRHYLTVEAIDNAGQGNRNTAQI 607
Fly 608 IVDILDVNDNAPTFPQRQYETKLLENQAEFETPLQLEARDADLNGTENSQVTYEIVEGLYRSNFT 672
Fly 673 IDPQSGLL----------------------------RPVHSFDF--------------------- 688
Fly 689 -EELVDGSS----------RRSDPYT----GGS----FSI--------------RE-----IDLL 715
Fly 716 VRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPEDLPGGSSVLQVTAIDRDGSAPNN 780
Fly 781 VVVYRIQTGAGDKFIINSETGVISVAHGANLDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCTV 845
Fly 846 NISIQDVN--------NKPPVLKEMPALQILENTPVGTLVYRIQATDLDHKAILRYKLNPEHCEG 902
Fly 903 RTEEGALVKSSEYDFLGAFEVDSIEGTLKVVKLLDRERVEHIKLAI-TVEDLAAAKGRQIAEGFL 966
Fly 967 SIQVLDENDNNPKFRLPFYRQSITENSINGAMIVNVLASDVDK--NRTITYALEGNPTYRSLMHL 1029
Fly 1030 DPQTGEIVVASKIDHEQHQWLNFSVRATDSGIPARSSLVDVYITVLDENDNNPYFV------GGS 1088
Fly 1089 KNYTISENAAPGTRVATLQAGDADSGDFGKITFLMDRISSQGKFTIDADTGVLTVADRLDRESKD 1153
Fly 1154 SYNLVIEAWDNYQFGFLAGESRNAFKQVFISILDEN---DNPPEVDLPMSC---VLITEYHELHE 1212
Fly 1213 RVASIVGKDADDPTTPNGRLDFAITRG-NKDGMFEL----------RQID-----AWNAQIFASK 1261
Fly 1262 ------------SLRNRYGNYSLTITTRD---MGLPAN--------------------------- 1284
Fly 1285 ------------------------------------IVHNT---------------LDICVSDFN 1298
Fly 1299 DHAPVFVRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKMFEVDGSTG 1363
Fly 1364 ELFLKEQLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISVNFTEHSD 1428
Fly 1429 PGSERIKLPDTIDKDQLELDDPN-DTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREVIAN 1492
Fly 1493 --FTLY--------------VRATENCRNDSI-------------SGGEKRRRMGIEINNRLGGI 1528
Fly 1529 VHNQQFGY---DRFKHSRQLRSTESNEYG---PEDAEL-----LSYEAYDSSQEDPTGGLATTHP 1582
Fly 1583 ELDSTVIKVKVRVLDINDNPPRFRSKIFTGGITTNADFGLKFMRVEATDADEGDNGRIGYYQVGE 1647
Fly 1648 IRQTLSEGLENVRKAPFLLDQETGEV 1673 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | 28/99 (28%) |
Cadherin_repeat | 179..276 | CDD:206637 | 35/98 (36%) | ||
Cadherin_repeat | 287..388 | CDD:206637 | 29/104 (28%) | ||
Cadherin_repeat | 397..506 | CDD:206637 | 27/110 (25%) | ||
Cadherin_repeat | 514..617 | CDD:206637 | 31/114 (27%) | ||
Cadherin_repeat | 625..742 | CDD:206637 | 39/203 (19%) | ||
Cadherin_repeat | 751..853 | CDD:206637 | 23/101 (23%) | ||
Cadherin_repeat | 865..976 | CDD:206637 | 29/111 (26%) | ||
Cadherin_repeat | 985..1080 | CDD:206637 | 30/96 (31%) | ||
Cadherin_repeat | 1090..1191 | CDD:206637 | 29/103 (28%) | ||
CA | 1221..1302 | CDD:214520 | 25/189 (13%) | ||
Cadherin_repeat | 1312..1409 | CDD:206637 | 34/96 (35%) | ||
Cadherin_repeat | 1418..>1502 | CDD:206637 | 32/100 (32%) | ||
Cadherin_repeat | 1617..1710 | CDD:206637 | 19/57 (33%) | ||
Dchs1 | XP_006507718.1 | Cadherin_repeat | 183..273 | CDD:206637 | 0/1 (0%) |
Cadherin_repeat | 284..385 | CDD:206637 | 30/104 (29%) | ||
Cadherin_repeat | 394..492 | CDD:206637 | 35/101 (35%) | ||
Cadherin_repeat | 508..602 | CDD:206637 | 30/103 (29%) | ||
Cadherin_repeat | 616..708 | CDD:206637 | 24/102 (24%) | ||
Cadherin_repeat | 717..815 | CDD:206637 | 31/113 (27%) | ||
Cadherin_repeat | 823..915 | CDD:206637 | 16/93 (17%) | ||
Cadherin_repeat | 928..1024 | CDD:206637 | 23/96 (24%) | ||
Cadherin_repeat | 1034..1124 | CDD:206637 | 21/98 (21%) | ||
Cadherin_repeat | 1138..1235 | CDD:206637 | 30/119 (25%) | ||
Cadherin_repeat | 1248..1341 | CDD:206637 | 30/92 (33%) | ||
Cadherin_repeat | 1358..1446 | CDD:206637 | 28/94 (30%) | ||
Cadherin_repeat | 1469..1565 | CDD:206637 | 18/95 (19%) | ||
Cadherin_repeat | 1578..1675 | CDD:206637 | 8/96 (8%) | ||
Cadherin_repeat | 1684..1777 | CDD:206637 | 34/96 (35%) | ||
Cadherin_repeat | 1786..1880 | CDD:206637 | 33/105 (31%) | ||
Cadherin_repeat | 1890..1984 | CDD:206637 | 27/107 (25%) | ||
Cadherin_repeat | 1992..2089 | CDD:206637 | 19/65 (29%) | ||
Cadherin_repeat | 2116..2192 | CDD:206637 | |||
Cadherin_repeat | 2207..2300 | CDD:206637 | |||
Cadherin_repeat | 2308..2406 | CDD:206637 | |||
Cadherin_repeat | 2415..2505 | CDD:206637 | |||
Cadherin_repeat | 2514..2611 | CDD:206637 | |||
Cadherin_repeat | 2619..2731 | CDD:206637 | |||
Cadherin_repeat | 2739..2835 | CDD:206637 | |||
Cadherin_repeat | 2845..2941 | CDD:206637 | |||
Cadherin_repeat | 2950..3056 | CDD:206637 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |