Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017169419.1 | Gene: | Cdh23 / 22295 | MGIID: | 1890219 | Length: | 3361 | Species: | Mus musculus |
Alignment Length: | 1982 | Identity: | 585/1982 - (29%) |
---|---|---|---|
Similarity: | 922/1982 - (46%) | Gaps: | 286/1982 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 SSISIQVIILTTLISLVASNRPPRFAIDGQSEIVLRLKESPETKVGTLIYTLKGYDPD---NDPL 98
Fly 99 TFGKRNSHDSEIIRIENTGGNEAKIFLAKELDRELQDEYAIVLTLTD----SHYSDHNYVTQSFL 159
Fly 160 LLVEDINDNVPTF-LPYQNAIEIPEGSAPGV-VSTLEATDADEGAYGQVVYYLQELDGDNDV-FS 221
Fly 222 IATHQGKGILRLQKELDYERKSLYQLRVLAIDRANQGPINTGTAAILVKVKDLEDQPPEF----V 282
Fly 283 EVQAVARIAEDAP--VGTKVLRVRAIDGDRGINNPIAYSLEANDL---FDINPHTGIVHTLTKLD 342
Fly 343 REEQSDQVNGAHILRISATELSKSNTQMAPTTVRTEVTVIVSDVNDEIPTFGETVYR--CEVNEN 405
Fly 406 AQTNTPLNFIDEEVQNVVFDHDEGNNGTFRLFL---DPPNDLFEIVPELAVNEANFMLRVKNSKS 467
Fly 468 LDFEQFTEVNFTIFAREVDEPSRWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHV 532
Fly 533 QAVDVDSGDYGTMGIRYTNLRGGIAHLLNLNPITGVITIKQAGGTAFDREIISRHYLTVEAIDNA 597
Fly 598 GQ---GNRNTAQIIVDILDVNDNAPTFPQRQYETKLLENQAEFETPL-----QLEARDADLNGTE 654
Fly 655 N--SQVTYEIVEGLYRSNFTIDPQSGLLRPVHS---FDFEELVDGSSRRSDPYTGGSFSIREIDL 714
Fly 715 LVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPEDLPGGSSVLQVTAIDRDGSAPN 779
Fly 780 NVVVYRIQTGAGDKFIINSETGVISVAHGANLDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCT 844
Fly 845 VNISIQDVN-NKPPVLKEMPALQILENTPVGTLVYRIQATDLDHKAILRYKLNPEHCEGRTEEGA 908
Fly 909 LVKSSEYDFLGAFEVDSIEGTLKVVKLLDRERVEHIKLAITVEDLAA---AKGRQIAEGFLSIQV 970
Fly 971 LDENDNNPKFR---LPFYRQSITENSINGAMIVNVLASDVDK--NRTITYALEG--NPTYRSLMH 1028
Fly 1029 LDPQTGEIVVASKIDHEQHQWLNFSVRATDSGIPARSSLVDVYITVLDENDNNPYFVGGSKNYTI 1093
Fly 1094 SENAAPGTRVATLQAGDADSGDFGKITFLMDRISSQGKFTIDADTGVLTVADRLDRESKDSYNLV 1158
Fly 1159 IEAWDNYQFGFLAGESRNAFKQVFISILDENDNPPEVDLPMSCVLITEYHELHERVASIVGKDAD 1223
Fly 1224 DPTTPNGRLDFAITRGNKDGMFELRQIDAWNAQIFASKSLRNRYGNYSLTITTRDMGLPANIVHN 1288
Fly 1289 TLDICVSDFNDHAPVFVRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYR-LKPDPLGS 1352
Fly 1353 YKMFEVDGSTGELFLKEQLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFM-- 1415
Fly 1416 ------VNEISVNFTEHSDPGSERIKLPDTIDKDQLELDDPNDTPSQVCYFIVNGNEAGYFRLDP 1474
Fly 1475 ETHILTVDRELDREVIANFTLYVRATENCRNDSISGGEKRRRMGIEINNRLGGIVHNQQFGYDRF 1539
Fly 1540 KHSRQLRSTESNEYGPEDA-ELLSYEAYDSSQEDPTGGLATTHPELDSTVIKVKVRVLDINDNPP 1603
Fly 1604 RFRSKIFTGGITTNADFGLKFMRVEATDADEGDNGRIGYYQVGEIR--QTLSEGLENVRKAPFLL 1666
Fly 1667 DQETG-----EVQLNFDPQKGMKGYFDFVVLANDTSGMKDVAHVFIYLLREDQKVRFVFRLQPDE 1726
Fly 1727 LRSRVDSFRDTLSNITESIVNIDEIKVHENKDGSVDKTKTDLYMHLVEREDNSIYEVSEVLKLID 1791
Fly 1792 SHIESLNGLFKELNVLDTQAAEAQLLTAGPSRGPLFVWLIFTNLFLATLLVVTIALCASQRNGY- 1855
Fly 1856 ----RRQLRAAKVNIFRGHSSMSLQDAQEPATRVPNTNKHSVQGSNPIWLKGYDNEWFKSEESGS 1916
Fly 1917 IGGHDSLDDNFLAVATQDMHETLKGTAKLFNN 1948 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | 26/98 (27%) |
Cadherin_repeat | 179..276 | CDD:206637 | 27/98 (28%) | ||
Cadherin_repeat | 287..388 | CDD:206637 | 29/105 (28%) | ||
Cadherin_repeat | 397..506 | CDD:206637 | 29/113 (26%) | ||
Cadherin_repeat | 514..617 | CDD:206637 | 29/105 (28%) | ||
Cadherin_repeat | 625..742 | CDD:206637 | 34/126 (27%) | ||
Cadherin_repeat | 751..853 | CDD:206637 | 45/101 (45%) | ||
Cadherin_repeat | 865..976 | CDD:206637 | 30/113 (27%) | ||
Cadherin_repeat | 985..1080 | CDD:206637 | 35/98 (36%) | ||
Cadherin_repeat | 1090..1191 | CDD:206637 | 39/100 (39%) | ||
CA | 1221..1302 | CDD:214520 | 20/80 (25%) | ||
Cadherin_repeat | 1312..1409 | CDD:206637 | 26/97 (27%) | ||
Cadherin_repeat | 1418..>1502 | CDD:206637 | 28/83 (34%) | ||
Cadherin_repeat | 1617..1710 | CDD:206637 | 27/99 (27%) | ||
Cdh23 | XP_017169419.1 | Cadherin_repeat | 51..137 | CDD:206637 | |
Cadherin_repeat | 145..240 | CDD:206637 | |||
Cadherin_repeat | 249..353 | CDD:206637 | |||
Cadherin_repeat | 361..463 | CDD:206637 | |||
Cadherin_repeat | 472..564 | CDD:206637 | |||
Cadherin_repeat | 573..674 | CDD:206637 | |||
Cadherin_repeat | 683..781 | CDD:206637 | |||
Cadherin_repeat | 789..893 | CDD:206637 | |||
Cadherin_repeat | 901..997 | CDD:206637 | |||
Cadherin_repeat | 1006..1105 | CDD:206637 | |||
Cadherin_repeat | 1113..1210 | CDD:206637 | |||
Cadherin_repeat | 1225..1315 | CDD:206637 | |||
Cadherin_repeat | 1324..1421 | CDD:206637 | 2/19 (11%) | ||
Cadherin_repeat | 1433..1530 | CDD:206637 | 27/103 (26%) | ||
Cadherin_repeat | 1540..1637 | CDD:206637 | 27/101 (27%) | ||
Cadherin_repeat | 1645..1747 | CDD:206637 | 32/112 (29%) | ||
Cadherin_repeat | 1759..1854 | CDD:206637 | 28/108 (26%) | ||
Cadherin_repeat | 1862..1962 | CDD:206637 | 29/105 (28%) | ||
Cadherin_repeat | 1970..2072 | CDD:206637 | 34/126 (27%) | ||
Cadherin_repeat | 2080..2176 | CDD:206637 | 45/103 (44%) | ||
Cadherin_repeat | 2187..2296 | CDD:206637 | 30/114 (26%) | ||
Cadherin_repeat | 2308..2405 | CDD:206637 | 35/98 (36%) | ||
Cadherin_repeat | 2413..2511 | CDD:206637 | 39/101 (39%) | ||
Cadherin_repeat | 2520..2614 | CDD:206637 | 21/100 (21%) | ||
Cadherin_repeat | 2627..2725 | CDD:206637 | 26/97 (27%) | ||
Cadherin_repeat | 2742..2848 | CDD:206637 | 42/181 (23%) | ||
Cadherin_repeat | 2857..2958 | CDD:206637 | 30/107 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 168 | 1.000 | Domainoid score | I3825 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0007436 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |