Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_497641.2 | Gene: | cdh-1 / 187783 | WormBaseID: | WBGene00019994 | Length: | 2779 | Species: | Caenorhabditis elegans |
Alignment Length: | 2591 | Identity: | 538/2591 - (20%) |
---|---|---|---|
Similarity: | 883/2591 - (34%) | Gaps: | 887/2591 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 IDSMDYKKVRLKGQRRRSF--------------SSYISSISIQVIILTTLISLVASNRP------ 58
Fly 59 -------------PRFAIDGQSEIVLRLKE-----------------SPETKVGTLI-YTLKGYD 92
Fly 93 PDNDPL-TFGKRNSHDSEIIRIENTGGNEAKIFLAKE---------------------------- 128
Fly 129 ----LDRELQDEYAIVLTLTDSHYSDHNYVTQ-SFLLLVEDINDNVPTFLPYQNAIEIPEGSAPG 188
Fly 189 VVSTLEATDADEGAYGQVVYYLQELDGDNDVFSIATHQGKGILRLQKELDYERKSLYQLRVLAID 253
Fly 254 RANQGPINTGTAAILVKVKDLEDQPPEFVEVQAVARIAEDAPVGTKVLRVRAIDGDRGINNPIAY 318
Fly 319 SLEAND-LFDINPHTGIVHTLTKLDREEQSDQVNGAHILRISATEL-SKSNTQMAPTTVRTEVTV 381
Fly 382 IVSDVNDEIPTFGETVYRCEVNENAQTNTPLNFIDEEVQNVVFDHDEGNNGTFRLFLDPPNDLFE 446
Fly 447 IVP---------------------------ELAVNEANFMLRV--KNSKSLDFEQ---------- 472
Fly 473 ------------FTEVNFTIFARE------VDE---------------------------PSRWS 492
Fly 493 S-AHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTMGIRYTNLRGGI 556
Fly 557 AHLLNLNPITGVITIKQAGGTAFDREIISRHYLTVEAIDNAGQGNRNTAQIIVDILDVNDNAPTF 621
Fly 622 PQRQYETKLLENQAEFETPLQLEARDADLNGTENSQVTYEIVEGLYRSNFTIDPQSGLLRPVHSF 686
Fly 687 DFEELVDGSSRRSDPYTGGSFSIREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFY 751
Fly 752 AKTVPEDLPGGSSVLQVTAIDRDGSAPNNVVVYRIQTGAGDKFIINSETGVISVAHGANLDPDLT 816
Fly 817 ESKRSLYTLSVIALDGGL---------------GNSQLM----------------TTC---TVN- 846
Fly 847 -------ISIQDVNN-----------------KPP-----VLKEM-------------------- 862
Fly 863 -PALQILENTPVGTLVYRIQATDLDHKAILRYKLNPEHCEGRTEE-GALV-------KSSEYDFL 918
Fly 919 GAFE-VDSIEGTLKVVKL--------LDRERVE--HIKLAI---------------TVEDLAAA- 956
Fly 957 ---------------------------------KGRQIAEGFLS---------IQVLDEND---- 975
Fly 976 --NNPKFRLP-FYRQSITENSINGAMIVNVLASDVDKNRTITYALE--GNPTYRSLMHLDPQTGE 1035
Fly 1036 IVVA-----------------------------SKIDHE----------QHQWLNFSVRATD--- 1058
Fly 1059 -SGIPARSSL--------VDVYITVLDENDNNPYF-VGGSKNYTISENAAPGTRVATLQAGDADS 1113
Fly 1114 GDFGKITFLMD-------RISS---------------------------------QG---KFTID 1135
Fly 1136 ADTGVLTVADRLDRESKDSYNLVIEAWDNYQFGFLAGESRNAFKQVFISILDENDNPPEVDLPMS 1200
Fly 1201 CVLITEYHELHE--RVASIVG--KDADDPTTPNGRLDFAI---TRGNKD-----GMFELRQ---I 1250
Fly 1251 DAWNAQ----------IFASKSLR--NRYGNYSLT----------ITTRDMGLP----------- 1282
Fly 1283 ----------ANI--------------------------------------VHNTLDICVSDFND 1299
Fly 1300 HAPVFVRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKM-FEVDGSTG 1363
Fly 1364 ELFLKEQLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISVNFTEHSD 1428
Fly 1429 PGSERIKLPDTIDKDQ----LELDDPNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREV 1489
Fly 1490 I----ANFTLYVRATEN-----------------CRNDSISGGEKRR-RMGIEINNRLGGIVHNQ 1532
Fly 1533 QFGYDRFKHSRQLRSTESNEY-----GPEDAELLSYEAY---------DSSQEDPTGGLATTHP- 1582
Fly 1583 --ELDSTVI-------KVKVRVLDINDNPPRFRSKIFTGGITTNADFGLKFMRVEATDADEGDNG 1638
Fly 1639 RIGYYQVGEIRQTLSEGLENVRKAPFLLDQETGEVQLN--FDPQ--------------------- 1680
Fly 1681 --------------KGMKGYFDFVVL-------ANDTS--------------GMKDVAHVFIYLL 1710
Fly 1711 REDQ--------------KVRFVFRLQP----------DELRSR----------VDSFRD--TLS 1739
Fly 1740 NIT----------ESIVNIDEIKVHENKDGSV---------DKTKT----------DLYMHLVER 1775
Fly 1776 EDNSIYEVSEVLKLIDSHIESLNGLFKELNVLDTQAAEAQLLTAGPSRGPLFVWLIFTNLFLATL 1840
Fly 1841 LVVTIALCASQRNGYRRQLRAAKVNIFRGHSSMSLQDAQEPATRVPNTNK--HSVQ 1894 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | 22/126 (17%) |
Cadherin_repeat | 179..276 | CDD:206637 | 23/96 (24%) | ||
Cadherin_repeat | 287..388 | CDD:206637 | 25/102 (25%) | ||
Cadherin_repeat | 397..506 | CDD:206637 | 32/193 (17%) | ||
Cadherin_repeat | 514..617 | CDD:206637 | 23/102 (23%) | ||
Cadherin_repeat | 625..742 | CDD:206637 | 33/116 (28%) | ||
Cadherin_repeat | 751..853 | CDD:206637 | 29/143 (20%) | ||
Cadherin_repeat | 865..976 | CDD:206637 | 30/193 (16%) | ||
Cadherin_repeat | 985..1080 | CDD:206637 | 28/147 (19%) | ||
Cadherin_repeat | 1090..1191 | CDD:206637 | 33/143 (23%) | ||
CA | 1221..1302 | CDD:214520 | 25/172 (15%) | ||
Cadherin_repeat | 1312..1409 | CDD:206637 | 31/97 (32%) | ||
Cadherin_repeat | 1418..>1502 | CDD:206637 | 19/91 (21%) | ||
Cadherin_repeat | 1617..1710 | CDD:206637 | 31/150 (21%) | ||
cdh-1 | NP_497641.2 | Cadherin_repeat | 29..118 | CDD:206637 | |
Cadherin_repeat | 129..229 | CDD:206637 | 7/25 (28%) | ||
Cadherin_repeat | 238..328 | CDD:206637 | 15/90 (17%) | ||
Cadherin_repeat | 459..532 | CDD:206637 | 19/80 (24%) | ||
Cadherin_repeat | 546..637 | CDD:206637 | 26/103 (25%) | ||
Cadherin_repeat | 645..733 | CDD:206637 | 16/93 (17%) | ||
Cadherin_repeat | 746..833 | CDD:206637 | 13/86 (15%) | ||
Cadherin_repeat | 843..938 | CDD:206637 | 23/100 (23%) | ||
Cadherin_repeat | 947..1041 | CDD:206637 | 33/115 (29%) | ||
Cadherin_repeat | 1051..1136 | CDD:206637 | 23/93 (25%) | ||
Cadherin_repeat | 1337..1426 | CDD:206637 | 12/88 (14%) | ||
Cadherin_repeat | 1445..>1515 | CDD:206637 | 16/69 (23%) | ||
Cadherin_repeat | 1638..1723 | CDD:206637 | 22/93 (24%) | ||
Cadherin_repeat | 1734..1817 | CDD:206637 | 17/87 (20%) | ||
Cadherin_repeat | 1836..1923 | CDD:206637 | 10/86 (12%) | ||
Cadherin_repeat | 1934..2025 | CDD:206637 | 32/96 (33%) | ||
Cadherin_repeat | 2034..2120 | CDD:206637 | 18/93 (19%) | ||
Cadherin_repeat | 2135..2226 | CDD:206637 | 23/110 (21%) | ||
Cadherin_repeat | 2235..2330 | CDD:206637 | 21/105 (20%) | ||
Cadherin_repeat | 2345..2437 | CDD:206637 | 14/93 (15%) | ||
Cadherin_repeat | 2446..2534 | CDD:206637 | 16/92 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |