| Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_510685.2 | Gene: | cdh-9 / 186608 | WormBaseID: | WBGene00000401 | Length: | 623 | Species: | Caenorhabditis elegans |
| Alignment Length: | 724 | Identity: | 160/724 - (22%) |
|---|---|---|---|
| Similarity: | 262/724 - (36%) | Gaps: | 201/724 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 431 NGTFRLFLD-----PPNDLFEIVP-----------ELAVNEANFMLRVKN-------SKSLD--- 469
Fly 470 ----FEQFTEVNFTIFAREVDEPSRWSSAHVQIF--IRDQNDNFPEFSQTIYNASVLENSEQDTI 528
Fly 529 I-THVQAVDVDSGDYGTMGIRYTNLRGGIAHLLNL-NPITGVITIKQAGGTAFDR---EIISRHY 588
Fly 589 LTVEAIDNAGQGNRNTAQIIVDILDVNDNAPTFPQRQYETKLLENQAEFETPLQLEARDAD-LNG 652
Fly 653 TENSQVTYEIVEGLYRSNFTIDPQSGLLRPVHSFDFEELVDGSSR--RSDPYTGGSFSIREIDLL 715
Fly 716 VRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPEDLPGGSSVLQVTAIDRDGSAPNN 780
Fly 781 VVVYRIQTGAGDKFIINSETGVISVAHGANLDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCTV 845
Fly 846 NISIQDVNNKPPVLKEMPALQILENTPVGTLVYRIQATDLDHKAILRYKLNPEHCEGRTEEGALV 910
Fly 911 KSSEYDFLGAFEVDSIEGTLKVVKLLDRERVEHIKLAITVEDLAAAKGRQIAEGFLSIQVLDEND 975
Fly 976 NNPKFRLPFYRQSITENS----INGAMIVNVLASDVDKNRTITYALEGNPTYRSLMHLDPQTGEI 1036
Fly 1037 VVASKI------DHEQHQ--WLNFSVRATDSGIPARSSLVDVYITVLDENDNNPYFVGGSKNYTI 1093
Fly 1094 SENAAPGTR 1102 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | |
| Cadherin_repeat | 179..276 | CDD:206637 | |||
| Cadherin_repeat | 287..388 | CDD:206637 | |||
| Cadherin_repeat | 397..506 | CDD:206637 | 22/106 (21%) | ||
| Cadherin_repeat | 514..617 | CDD:206637 | 32/107 (30%) | ||
| Cadherin_repeat | 625..742 | CDD:206637 | 22/119 (18%) | ||
| Cadherin_repeat | 751..853 | CDD:206637 | 23/101 (23%) | ||
| Cadherin_repeat | 865..976 | CDD:206637 | 21/110 (19%) | ||
| Cadherin_repeat | 985..1080 | CDD:206637 | 20/106 (19%) | ||
| Cadherin_repeat | 1090..1191 | CDD:206637 | 3/13 (23%) | ||
| CA | 1221..1302 | CDD:214520 | |||
| Cadherin_repeat | 1312..1409 | CDD:206637 | |||
| Cadherin_repeat | 1418..>1502 | CDD:206637 | |||
| Cadherin_repeat | 1617..1710 | CDD:206637 | |||
| cdh-9 | NP_510685.2 | E_set | <80..129 | CDD:298831 | 13/54 (24%) |
| Cadherin_repeat | 135..234 | CDD:206637 | 31/106 (29%) | ||
| Cadherin_repeat | 338..>405 | CDD:206637 | 18/81 (22%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 0 | 0.000 | |||||