Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001294412.1 | Gene: | cdh-8 / 184652 | WormBaseID: | WBGene00017576 | Length: | 1684 | Species: | Caenorhabditis elegans |
Alignment Length: | 1930 | Identity: | 458/1930 - (23%) |
---|---|---|---|
Similarity: | 780/1930 - (40%) | Gaps: | 442/1930 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 93 PDNDPLTFGKRNSHDSEIIRIENTGGNEAKIFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQS 157
Fly 158 FLLLVE--------------DINDNVPTFLPYQNAIEIPEGSAPGV----VSTLEATDADEGAYG 204
Fly 205 QVVYYLQELDGDNDVFSIATHQ---GK--GILRLQKELDYERKSLYQLRVLAID---RANQGPIN 261
Fly 262 TGTAA--ILVKVKDLEDQPPEFV-EVQAVARIAEDAPVGTKVLRVRAIDGDRGINNPIAYSLEAN 323
Fly 324 DLFDINPHTGIVHTLTKLDREEQSDQVNGAHILRISATELSKSNT-QMAPTTVRTEVTVIVSDVN 387
Fly 388 DEIPTFGE-TVYRCEVNENAQT-NTPLNF-----IDEEVQNVVFDHDEGNNGTFRLFLDPPNDLF 445
Fly 446 EIVPELAVNEANFMLRVKNSKSLDFEQFTEVNFTIFAREVDEPSRWSSAHVQIFIRDQNDN---- 506
Fly 507 ---------FPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDY---GTMGIRYTNLRGGIAHL 559
Fly 560 LNLNPITGVITIKQAGGTAFDREIISRHYLTVEAIDNAGQGNRNTAQIIVDILDVNDNAPTFPQR 624
Fly 625 QYETKLLENQAEFETPLQLEARDADLNGTENSQVTYEIVEGLYRSNFTIDPQSGLLRPVHSFDFE 689
Fly 690 ELVDGSSRRSDPYTGGSFSIREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKT 754
Fly 755 VPEDLPGGSSVLQVTAIDRDGSAPNNVVVYRIQTGAGDKFIINSETGVISVAHGANLDPDLTESK 819
Fly 820 RSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVN--NKPPVLKEMPALQILENTPVGTLVYRIQA 882
Fly 883 TDL-DHKAILRYKLNPEHCEGRTEEGALVKSSEYDFLGA-----FEVDSIEGTLKVVKLLDRERV 941
Fly 942 EHIKLAITVEDLAAAKGRQIAEGFLSIQVLDENDNNPKFRLPFYRQSITENSINGAMIVNVLASD 1006
Fly 1007 VDKNRTITYALEGNPTYRSLMHLDPQTGEIVVASKIDHEQHQWLNFSVR--ATDSGIPARSSLVD 1069
Fly 1070 VYITVLDENDNNPYFVGGSKNYTIS--ENAAPGTRVATLQ---AGDADSGDFGKITFLMDRISSQ 1129
Fly 1130 GKFTIDADTGVLTVADRLDRESKDSYNLVIEAWDNYQFGFLAGESRNAFKQVF----ISILDEND 1190
Fly 1191 NPPEV-DLPMSCVLITEYHELHERVASIVGKDADDPTTPNGRLDFAITRGNKDGMFELRQIDAWN 1254
Fly 1255 AQIFASKSLRNRYG-NYSLTITTRDM-GLPANIVHNTLDICVSDF----NDHAPVFVRPLHNTTV 1313
Fly 1314 RIPENATVGTLI-LQAYASDGDMGQNALVRYRLKPDPLGSYKMFEVDGSTGELFLKEQLNREKQK 1377
Fly 1378 IHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISVNFTEHSDPGSERI-KLPDTID 1441
Fly 1442 KDQLELDDPNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREVIANFTLYVRATENCRND 1506
Fly 1507 SISGGEKRRRMGIEINNRLGGIVHNQQFGYDRFKHSRQLRSTESNEYGPEDAELLSYEAYDS--S 1569
Fly 1570 QEDPTGGLATTHPELDSTVIKVKVRVLDINDNPPRFRSKIFT-----GGITTNADFGLKFMRVEA 1629
Fly 1630 TDADEGDNGRIGYYQVGEIRQTLSEGLENVRKAPFLLDQETGEVQLNFDPQKGMK-GYFDFVVLA 1693
Fly 1694 NDTSGMKDVAHVFIYLLREDQKVRFVFRL------QPDELRSRVDSFRDTLSNITESIVNIDEIK 1752
Fly 1753 VHENKDGS------VDKTKTDLYMHLVEREDNSIYEVSEVLKLIDSHIESLNGLF----KELNVL 1807
Fly 1808 DTQAAEAQLLTAG-------------PSRGPLFVWLIFTNLFLATLLVVTIALCASQRNGYRRQL 1859
Fly 1860 RAAKVNIFRGHSSMSLQDAQEPATRVPNTNKHSVQGSNPIWLKGY 1904 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | 17/88 (19%) |
Cadherin_repeat | 179..276 | CDD:206637 | 33/110 (30%) | ||
Cadherin_repeat | 287..388 | CDD:206637 | 23/101 (23%) | ||
Cadherin_repeat | 397..506 | CDD:206637 | 16/114 (14%) | ||
Cadherin_repeat | 514..617 | CDD:206637 | 27/105 (26%) | ||
Cadherin_repeat | 625..742 | CDD:206637 | 33/116 (28%) | ||
Cadherin_repeat | 751..853 | CDD:206637 | 21/101 (21%) | ||
Cadherin_repeat | 865..976 | CDD:206637 | 30/116 (26%) | ||
Cadherin_repeat | 985..1080 | CDD:206637 | 24/96 (25%) | ||
Cadherin_repeat | 1090..1191 | CDD:206637 | 29/109 (27%) | ||
CA | 1221..1302 | CDD:214520 | 18/86 (21%) | ||
Cadherin_repeat | 1312..1409 | CDD:206637 | 26/97 (27%) | ||
Cadherin_repeat | 1418..>1502 | CDD:206637 | 17/84 (20%) | ||
Cadherin_repeat | 1617..1710 | CDD:206637 | 24/93 (26%) | ||
cdh-8 | NP_001294412.1 | Cadherin_repeat | <55..121 | CDD:206637 | 15/83 (18%) |
Cadherin_repeat | 131..232 | CDD:206637 | 33/111 (30%) | ||
Cadherin_repeat | 457..544 | CDD:206637 | 27/105 (26%) | ||
Cadherin_repeat | 552..647 | CDD:206637 | 33/116 (28%) | ||
Cadherin_repeat | 656..741 | CDD:206637 | 24/110 (22%) | ||
Cadherin_repeat | 861..952 | CDD:206637 | 24/94 (26%) | ||
Cadherin_repeat | 964..1060 | CDD:206637 | 28/106 (26%) | ||
Cadherin_repeat | 1184..1265 | CDD:206637 | 25/87 (29%) | ||
Cadherin_repeat | 1275..1375 | CDD:206637 | 33/183 (18%) | ||
Cadherin_repeat | 1396..1476 | CDD:206637 | 24/86 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H71045 | |
Inparanoid | 1 | 1.050 | 319 | 1.000 | Inparanoid score | I1505 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG46529 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0007436 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_112779 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X13589 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.870 |