Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_498687.2 | Gene: | cdh-3 / 176085 | WormBaseID: | WBGene00000395 | Length: | 3361 | Species: | Caenorhabditis elegans |
Alignment Length: | 2478 | Identity: | 495/2478 - (19%) |
---|---|---|---|
Similarity: | 841/2478 - (33%) | Gaps: | 928/2478 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 39 ISIQVIILTTLISLVASNRPPRFAIDGQSEIVLRLKESPETKVGTLIYTLK---GYDPDNDPLTF 100
Fly 101 GKRNSHDSEIIRIENTGGNEAKIFLAKELDRELQDEYAI-VLTLTDSHYSDHNYVTQSFLLLVED 164
Fly 165 INDNVPTFLPYQNAIEIPEGSAPG-VVSTLEATDADEGAYGQVVYY-----LQELDGDNDVFSIA 223
Fly 224 THQGKGILRLQKELDYERKSLYQLRVLAIDRANQG-PINTGTAAILVKVKDLEDQPPEFVEVQAV 287
Fly 288 ARIAEDAPVGTKVLRVRAIDGDRGINNPIAYSLEANDLFDINPHTGIVHTLTKLDREEQSDQVNG 352
Fly 353 AHILRISATELSKSNTQMAPTTVRTEVTVIVSDVNDEIPTFGET---VYRCEVNENAQTNTPLNF 414
Fly 415 IDEEVQNVVFDHDEGNNGTFRLFLDPPND------------------LFEIVPELAVNEANFMLR 461
Fly 462 VKNSKSLDFEQFTEVNFTIFAREVDEPS-RWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSEQ 525
Fly 526 DTI----ITHVQA-----------------VDVDSGDYGTMGIRYTNLRGGIA--HL---LNLNP 564
Fly 565 IT--------------------------GVITIKQAG----------GTAFDREIISRHYLTVEA 593
Fly 594 IDNAG---QG--------------------NRNTAQ---IIVDILDVNDNAPTFPQRQYETKLLE 632
Fly 633 NQAEFETPL-----QLEARDAD--LNGTENSQVTYEIV--EGLYRSNFTIDPQSGLLRPVHSFDF 688
Fly 689 EELVDGSSRRSDPYTGGSFSIREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAK 753
Fly 754 TVPEDLPGGSS---VLQVTAIDRDGSAPNNVVVYRIQTGAGDKFIINSETGVISVAHGANLDPDL 815
Fly 816 TESKRSLYTLSVIALDGG---LGNSQLMTTCTVN--ISIQDVNNKPPVLKEMPALQILENTPVGT 875
Fly 876 LVYRIQATDLDHKAILRYKLNPE-HCEGR-----TEEGALVKSSEYDFLGAFEVDSIEGTLKV-- 932
Fly 933 -VKLLDRERVEHIKLAITVEDLAAAKGRQIAEGFLS-------IQVLDENDNNP---KFRLPFYR 986
Fly 987 QSITEN-SINGAMIVNVLASDVDKNRTITYALEGNPTYRSLMHL--------------------D 1030
Fly 1031 PQTGEIVVASKIDHEQHQWLNFSVRATDSG--IPARSSLVD-VYITVLDENDNNPYFVGGSKNYT 1092
Fly 1093 ISEN--------------------------AAPGTRVATLQAG------DADSGDF--------- 1116
Fly 1117 ----------------GKITF--LMDRI------------------SSQGKFTIDADTGVLTVAD 1145
Fly 1146 R-----------------------------------------------LDRESKDSYNLVIEAWD 1163
Fly 1164 NYQFGFLAG-----------------------------------------------ESRNAFKQV 1181
Fly 1182 FISILDENDNPPEV-DLPMSCVLITEYHELHERVA-------------SIVGKDA---------- 1222
Fly 1223 -----------------------------DDPTTPNGRLDFAITR----------------GNKD 1242
Fly 1243 -GMFELRQIDAW--------------------------------------------------NAQ 1256
Fly 1257 IFASKS-----------------------------------------LRNRYGNYSLTITTRDMG 1280
Fly 1281 LPAN------------------------IVHNTLDICVSDFNDHAPVFVR-PLHNTTVRIPENAT 1320
Fly 1321 VG--TLILQAYASDGDMGQNALVRYRLKPDPLGSYKMFEVDGSTGELFLKEQLNREKQKIHEIRI 1383
Fly 1384 EAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISVNFTEHSDPGSERIKLPDTIDKDQ---- 1444
Fly 1445 ---LELDDPNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREVIANFTLYVRATENCRND 1506
Fly 1507 SISGGEKRRRMGIE------------INNRLGGI----------------VHNQQFGYDRFKHSR 1543
Fly 1544 --------------------------QLRSTESNEYG---------------------------- 1554
Fly 1555 ---PEDAELLSYEA-------------YDSSQEDPTGGLATTHPELD------------------ 1585
Fly 1586 ----STVIKVKVRVLDINDNPPRFRSKIFTGGITTNADFGLKFM-RVEATDADEGDNGRIGYYQV 1645
Fly 1646 G-----EIRQTLSEGLENVRKAPFLLDQETGEVQLNFDPQKGMKGYFDFVVLANDTSGMKDVAH- 1704
Fly 1705 -VFIYLLREDQKV-RF--VFRLQ-PDELRSRVDSFRDTLSNITESIVNIDEIKVHENKDGSVDKT 1764
Fly 1765 KTDLYMHLVEREDNSIYEVSEVLKLIDSHIESLNGLFKELNVLDTQAAEAQLLTAGPSRGPLFVW 1829
Fly 1830 LIFTNLFL 1837 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | 25/95 (26%) |
Cadherin_repeat | 179..276 | CDD:206637 | 33/103 (32%) | ||
Cadherin_repeat | 287..388 | CDD:206637 | 19/100 (19%) | ||
Cadherin_repeat | 397..506 | CDD:206637 | 20/127 (16%) | ||
Cadherin_repeat | 514..617 | CDD:206637 | 32/190 (17%) | ||
Cadherin_repeat | 625..742 | CDD:206637 | 38/125 (30%) | ||
Cadherin_repeat | 751..853 | CDD:206637 | 24/109 (22%) | ||
Cadherin_repeat | 865..976 | CDD:206637 | 24/126 (19%) | ||
Cadherin_repeat | 985..1080 | CDD:206637 | 23/118 (19%) | ||
Cadherin_repeat | 1090..1191 | CDD:206637 | 37/271 (14%) | ||
CA | 1221..1302 | CDD:214520 | 27/251 (11%) | ||
Cadherin_repeat | 1312..1409 | CDD:206637 | 35/98 (36%) | ||
Cadherin_repeat | 1418..>1502 | CDD:206637 | 23/90 (26%) | ||
Cadherin_repeat | 1617..1710 | CDD:206637 | 26/100 (26%) | ||
cdh-3 | NP_498687.2 | Cadherin_repeat | 31..113 | CDD:206637 | 25/101 (25%) |
Cadherin_repeat | 121..225 | CDD:206637 | 33/107 (31%) | ||
Cadherin_repeat | 242..326 | CDD:206637 | 20/95 (21%) | ||
Cadherin_repeat | 448..529 | CDD:206637 | 15/84 (18%) | ||
Cadherin_repeat | 637..734 | CDD:206637 | 38/123 (31%) | ||
Cadherin_repeat | 743..831 | CDD:206637 | 22/98 (22%) | ||
Cadherin_repeat | 1116..1184 | CDD:206637 | 11/67 (16%) | ||
Cadherin_repeat | 1285..1364 | CDD:206637 | 10/78 (13%) | ||
Cadherin_repeat | 1559..1643 | CDD:206637 | 10/89 (11%) | ||
Cadherin_repeat | 1671..1752 | CDD:206637 | 32/84 (38%) | ||
Cadherin_repeat | 1760..1853 | CDD:206637 | 27/117 (23%) | ||
CA | 1975..2043 | CDD:214520 | 13/67 (19%) | ||
Cadherin_repeat | 2050..2142 | CDD:206637 | 30/112 (27%) | ||
Cadherin_repeat | 2149..2241 | CDD:206637 | 19/120 (16%) | ||
Cadherin_repeat | 2250..2329 | CDD:206637 | |||
LamG | 3082..3201 | CDD:214598 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 54 | 1.000 | Domainoid score | I7543 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |