Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031754706.1 | Gene: | cdhr2 / 100491782 | XenbaseID: | XB-GENE-1004777 | Length: | 1320 | Species: | Xenopus tropicalis |
Alignment Length: | 1209 | Identity: | 334/1209 - (27%) |
---|---|---|---|
Similarity: | 555/1209 - (45%) | Gaps: | 207/1209 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 IQVII-LTTLISLVASNRPPRFAIDGQSEIVLRLKESPE-TKVGTLIYTLKGYDPDNDPLTFGKR 103
Fly 104 NSHDSEIIRIENTGGNEAKIFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFLLLVEDINDN 168
Fly 169 VPTFL--PYQNAI--EIPEGSAPGVVSTLEATDADEGAYGQVVYYLQELDGD----NDVFSIATH 225
Fly 226 QGKGILRLQKELDYERKSL-YQLRVLAIDRA----NQGPINTGTAAILVKVKDLEDQPPEFVEVQ 285
Fly 286 AVARIAEDAPVGTKVLRVRAIDGDRGINNPIAYSLE---ANDLFDINPHTGIVHTLTKLDRE--- 344
Fly 345 EQSDQVNGAHILRISATELSKS-NTQMAPTTVRTEVTVIVSDVNDEIPTFGETVYRCEVNENAQT 408
Fly 409 NTP-LNFIDE------------EVQNVVFDHDEGNNGTFRLFL-DPPNDLFEIVPELAVNEANFM 459
Fly 460 LRVKNSKSLDFEQFTEVNFTIFAREVDEPSRWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSE 524
Fly 525 QDTIITHVQAVDVDSGDYGTMGIRYTNLRGGIAHLLNLNPITGVITIKQAGGTAFDREIISRHYL 589
Fly 590 TVEAIDNAGQGNRNTAQIIVDILDVNDNAPTFPQRQYETKLLENQAEFETPLQLEARDADLNGTE 654
Fly 655 NSQVTYEIVEGLYRSNFTIDPQSGLLRPVHSFDFEELVDGSSRRSDPYTGGSFSIREIDLLVRAR 719
Fly 720 DSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPED-LPGGSSVLQVTAIDRDGSAPNNVVV 783
Fly 784 YRIQTGAGDKFIINSE-------TGVISVAHGANLDPDLT---ESKRSLYTLSVIALDGGLGNSQ 838
Fly 839 LMTTCTVNISIQDVNNKPPVL--KEMPALQILENTPVG-TLVYRIQATDLDHKAILRYKLNPEHC 900
Fly 901 EGRTEEGALVKSSEYDFL-----GAFEVDSIEGTLKVVKLLDRERVEHIKLAITVEDLAAAKGRQ 960
Fly 961 IAEG-FLSIQVLDENDNNPKF------------------RLPFYRQSITENSINGAMIVNVLASD 1006
Fly 1007 VDKNRTITYALEGNPTYRSLMHL---------DPQTGEIVVASKIDHEQHQWLNFSVRATDSGIP 1062
Fly 1063 ARSSLVDVYITVLDENDNNPYFVGGSKNYTISENAAPGTRVATLQAGDADSGDFGKITFLMDRIS 1127
Fly 1128 SQGKFTIDADTGVLTVADRLD------RESKDSYNLVIE 1160 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | 26/92 (28%) |
Cadherin_repeat | 179..276 | CDD:206637 | 30/107 (28%) | ||
Cadherin_repeat | 287..388 | CDD:206637 | 42/107 (39%) | ||
Cadherin_repeat | 397..506 | CDD:206637 | 32/122 (26%) | ||
Cadherin_repeat | 514..617 | CDD:206637 | 34/102 (33%) | ||
Cadherin_repeat | 625..742 | CDD:206637 | 36/116 (31%) | ||
Cadherin_repeat | 751..853 | CDD:206637 | 33/112 (29%) | ||
Cadherin_repeat | 865..976 | CDD:206637 | 28/117 (24%) | ||
Cadherin_repeat | 985..1080 | CDD:206637 | 17/103 (17%) | ||
Cadherin_repeat | 1090..1191 | CDD:206637 | 12/77 (16%) | ||
CA | 1221..1302 | CDD:214520 | |||
Cadherin_repeat | 1312..1409 | CDD:206637 | |||
Cadherin_repeat | 1418..>1502 | CDD:206637 | |||
Cadherin_repeat | 1617..1710 | CDD:206637 | |||
cdhr2 | XP_031754706.1 | Cadherin_repeat | 38..127 | CDD:206637 | 27/101 (27%) |
Cadherin_repeat | 135..242 | CDD:206637 | 32/112 (29%) | ||
Cadherin_repeat | 251..>332 | CDD:206637 | 33/84 (39%) | ||
Cadherin_repeat | 381..483 | CDD:206637 | 26/101 (26%) | ||
Cadherin_repeat | 491..587 | CDD:206637 | 33/101 (33%) | ||
Cadherin_repeat | 595..697 | CDD:206637 | 36/116 (31%) | ||
Cadherin_repeat | 705..811 | CDD:206637 | 33/114 (29%) | ||
Cadherin_repeat | 941..1045 | CDD:206637 | 22/147 (15%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 56 | 1.000 | Domainoid score | I10864 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |