Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012811431.2 | Gene: | dchs2 / 100485624 | XenbaseID: | XB-GENE-6048959 | Length: | 3475 | Species: | Xenopus tropicalis |
Alignment Length: | 2080 | Identity: | 509/2080 - (24%) |
---|---|---|---|
Similarity: | 822/2080 - (39%) | Gaps: | 510/2080 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 47 TTLISLVASN-RPPRF-AIDGQSEIVLRLKESPETKVGTLIYTLKGYDPD----NDPLTFGKRNS 105
Fly 106 HDSEIIRIE-NTGGNEAKIFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFLLLVEDINDNV 169
Fly 170 PTFLPYQNAIEIPEGSAPG-VVSTLEATDADEGAYGQVVYYLQELDG-----DNDVFSIATHQGK 228
Fly 229 GILRLQKELDYER-KSLYQLRVLAIDRANQGPINTGTAAILVKVKDLEDQPPEFVEVQAVARIAE 292
Fly 293 DAPVGTKVLRVRAIDGDRGINNPIAYSL---EANDLFDINPHTGIVHTLTKLDREEQS------- 347
Fly 348 DQVNGAHILRISAT-ELSKSNTQMAPTTV-RTEVTVIVSDVNDEIPTFGETVYRCEVNENAQTNT 410
Fly 411 PLNFIDEEVQNVVFDHDEGNNGTFRLFLDPPNDLFEIVPELAVNEANFMLRVKNSKSLDFEQFTE 475
Fly 476 VNFTIFAREVDEPSRWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSG 540
Fly 541 DYG------------------TMGIRYTN--LRGGIAHLLNL------NPI-TGVITI------- 571
Fly 572 KQAGGTAFDREI----------ISRHYLTVEA-------------------IDN----------- 596
Fly 597 --------------------AGQGNRN-----TAQIIVDILDVNDNAPTFPQRQYETKLLENQAE 636
Fly 637 FETPLQLEARDADLNGTENSQVTYEIV-EGLYRSNFTIDPQSGLLRPVHSFDFEELVDGSSRRSD 700
Fly 701 PYTGGSFSIREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKTVPEDLPGGSS- 764
Fly 765 -VLQVTAIDRDGSAPNN--VVVYRIQTGAGDKFIINSETGVI--SVAHGANLDPDLTESKRSLYT 824
Fly 825 LSVIALDGG-------------------------------------------------------- 833
Fly 834 ------LGNSQ-----LMTTCT-------------------------------------VNISIQ 850
Fly 851 DVNNKPPVLKE-MPALQILENTPVGTLVYRIQATDLD---HKAILRYKLNPEHCEGRTEEGALVK 911
Fly 912 SSEYDFLGAFEVDSIEGTLKVVKLLDRERVEHIKLAITVEDLAA-AKGRQIAEGFLSIQVLDEND 975
Fly 976 NNPK-FRLPFYRQSITENSINGAMIVNVLASDVDKNRT--ITYAL-EGNPTYRSLMHLDPQTGEI 1036
Fly 1037 VVASKIDHEQHQWLNFSVRATDSGIPARSSLVDVYITVLDENDNNPYFVGGSKNYTISENAAPGT 1101
Fly 1102 RVATLQAGDADSGDFGKITFLMDRISSQGKFTIDADTGVLTVADRLDRESKDSYNLVIEAWDNYQ 1166
Fly 1167 FGFLAGESRNAFKQVFISILDENDNPPEVDLPMSCVLITEYHEL---HERVASIVGKDADDPTTP 1228
Fly 1229 NGRLDFAITRGNKDGMFELRQIDAWNAQIFASKSL-RNRYGNYSLTITTRDMGLPANIVHNTLDI 1292
Fly 1293 CVSDFNDHAPVFVRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKMFE 1357
Fly 1358 VDGSTGELFLKEQLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISVN 1422
Fly 1423 FTEHSDPGSERIKLPDTIDKDQLELDDPNDTP----SQVCYFIVNGNEAGYFRLDPETHILTVDR 1483
Fly 1484 ELDREVIANFTLYVRATENCRNDSISGGEKRRRMGIEINNRLGGIVHNQQFGYDR---FKHSRQ- 1544
Fly 1545 ---LRSTESNE---------YGPEDAELLSYEAYDSSQE-----DP-TGGLATTHPEL------- 1584
Fly 1585 ------------DSTVIKVKVRVLDINDNPPRFRSKIFTGGITTNADFGLKFMRVEATDADEGDN 1637
Fly 1638 GRIGYYQVGEIRQTLSEGLENVRKAPFLLDQETGEVQLNFDPQKGMKGYFDFVVLAND----TSG 1698
Fly 1699 MKDVAHVFI---------------YLLREDQKVRFVF--------RLQPD-----------ELRS 1729
Fly 1730 RVDSFRDTLSNITESIVNIDEIKVH----ENKDGSVDKTKTDLYMHLVEREDN------SIYEVS 1784
Fly 1785 1784 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | 28/96 (29%) |
Cadherin_repeat | 179..276 | CDD:206637 | 27/103 (26%) | ||
Cadherin_repeat | 287..388 | CDD:206637 | 30/112 (27%) | ||
Cadherin_repeat | 397..506 | CDD:206637 | 22/108 (20%) | ||
Cadherin_repeat | 514..617 | CDD:206637 | 43/201 (21%) | ||
Cadherin_repeat | 625..742 | CDD:206637 | 28/117 (24%) | ||
Cadherin_repeat | 751..853 | CDD:206637 | 32/211 (15%) | ||
Cadherin_repeat | 865..976 | CDD:206637 | 35/114 (31%) | ||
Cadherin_repeat | 985..1080 | CDD:206637 | 28/97 (29%) | ||
Cadherin_repeat | 1090..1191 | CDD:206637 | 27/100 (27%) | ||
CA | 1221..1302 | CDD:214520 | 28/81 (35%) | ||
Cadherin_repeat | 1312..1409 | CDD:206637 | 29/96 (30%) | ||
Cadherin_repeat | 1418..>1502 | CDD:206637 | 14/87 (16%) | ||
Cadherin_repeat | 1617..1710 | CDD:206637 | 25/111 (23%) | ||
dchs2 | XP_012811431.2 | Cadherin_repeat | 42..137 | CDD:206637 | |
CA | <347..387 | CDD:214520 | |||
Cadherin_repeat | 394..488 | CDD:206637 | |||
Cadherin_repeat | <600..661 | CDD:206637 | 3/9 (33%) | ||
Cadherin_repeat | 672..769 | CDD:206637 | 28/106 (26%) | ||
Cadherin_repeat | 778..877 | CDD:206637 | 27/106 (25%) | ||
Cadherin_repeat | 885..977 | CDD:206637 | 26/91 (29%) | ||
Cadherin_repeat | 991..1085 | CDD:206637 | 25/126 (20%) | ||
Cadherin_repeat | 1095..1182 | CDD:206637 | 21/86 (24%) | ||
Cadherin_repeat | 1198..1295 | CDD:206637 | 19/96 (20%) | ||
Cadherin_repeat | 1305..1398 | CDD:206637 | 28/115 (24%) | ||
Cadherin_repeat | 1412..1502 | CDD:206637 | 25/97 (26%) | ||
Cadherin_repeat | 1517..1613 | CDD:206637 | 7/95 (7%) | ||
Cadherin_repeat | 1626..1723 | CDD:206637 | 34/112 (30%) | ||
Cadherin_repeat | 1732..1825 | CDD:206637 | 27/96 (28%) | ||
Cadherin_repeat | 1836..1932 | CDD:206637 | 27/101 (27%) | ||
Cadherin_repeat | 1942..2036 | CDD:206637 | 32/102 (31%) | ||
Cadherin_repeat | 2044..2141 | CDD:206637 | 31/101 (31%) | ||
Cadherin_repeat | 2149..2238 | CDD:206637 | 18/118 (15%) | ||
Cadherin_repeat | 2251..2345 | CDD:206637 | 17/94 (18%) | ||
Cadherin_repeat | 2354..2450 | CDD:206637 | 25/106 (24%) | ||
Cadherin_repeat | 2459..2550 | CDD:206637 | 18/93 (19%) | ||
Cadherin_repeat | 2558..2652 | CDD:206637 | 3/5 (60%) | ||
Cadherin_repeat | 2662..2770 | CDD:206637 | |||
Cadherin_repeat | 2778..2875 | CDD:206637 | |||
Cadherin_repeat | 2888..2983 | CDD:206637 | |||
Cadherin_repeat | 2992..3087 | CDD:206637 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |