Sequence 1: | NP_731930.3 | Gene: | Cad88C / 41774 | FlyBaseID: | FBgn0038247 | Length: | 1981 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002664697.2 | Gene: | dchs1a / 100334632 | ZFINID: | ZDB-GENE-120410-3 | Length: | 3275 | Species: | Danio rerio |
Alignment Length: | 2383 | Identity: | 578/2383 - (24%) |
---|---|---|---|
Similarity: | 905/2383 - (37%) | Gaps: | 681/2383 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 ISLVASNRPPRFAIDGQSEIVLRLKESPE-TKVGTLIYTLKGYDPDNDP---LTFGKRNSHDSEI 110
Fly 111 IRIENTGGNEAKIFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFLLL--VEDINDNVPTFL 173
Fly 174 PYQNAIEIPEGSAP---------------GVVSTLEATDADEGAYGQVVYYLQELDGDNDVFSIA 223
Fly 224 THQGKGILRLQKELDYERKSLYQLRVLAIDRANQGPI-NTGTAAILVKVKDLEDQPPEFVEVQAV 287
Fly 288 ARIAEDAPVGTKVLRVRAIDGDRGINNPIAYSLEANDL-FDINPHTGIVHTLTKLDREEQSDQVN 351
Fly 352 GAHILRISATELSKSNTQMAPTTVRTEVTVIVSDVNDEIPTFGETVYRCEVNENAQTNTPLNFID 416
Fly 417 EEVQNVVF--------DHDEGNNGTF----------RLFLDP----------------PNDLFEI 447
Fly 448 V-------PELAV-----------------NEANFMLR-------------VKNSKSLDFEQFTE 475
Fly 476 VNFTI--------------------FAREVDE---PSRWSSAHVQIF---------------IRD 502
Fly 503 QNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTMGIRYTNLR--GGIAHLLNLNPI 565
Fly 566 TGVITIKQAGGTAFDREIISRHYLTVEAIDNA---GQGNRNTAQIIVDILDVNDNAPTFPQRQYE 627
Fly 628 TKLLENQAEFETPLQLEARDADLNGTENSQVTYEIVEGLYRSNFTIDPQSG---LLRPVHSFDFE 689
Fly 690 ELVDGSSRRSDPYTGGSFSIREIDLLVRARDSGIPMLSTVVPVLIYVQDVNDNAPIFQQSFYAKT 754
Fly 755 VPEDLPGGSSVLQVTAIDRDGSAPNNVVVYRIQTGA--GDKFIINSETGVISVAHGANLDPDLTE 817
Fly 818 SKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVN-NKPPVLKEMPALQILENTPVGTLVYRIQ 881
Fly 882 ATDLD--HKAILRYKLNPEHCEGRTEEGALVKSSEYDFLGAFEVDSIEGTLKVVKLLDRERVEHI 944
Fly 945 KLAITVEDLAAAKGRQIAEGFLSIQVLDENDNNPKFRLPFYRQSITENSINGAMIVNVLASDVDK 1009
Fly 1010 --NRTITYALEGNPTYRSLMHLDPQTGEIVVASKIDHEQHQWLNFSVRATDSGIP-ARSSLVDVY 1071
Fly 1072 ITVLDENDNNPYFVGGSKNYTISENAAPGTRV-ATLQAGDADSGDFGKITFLMDRISSQGK-FTI 1134
Fly 1135 DADTGVLTVADRLDRESKDSYNLVIEAWD-------------------NYQ-------------- 1166
Fly 1167 -------------------------FGFLAGE--------------------------------- 1173
Fly 1174 ------SRNAFKQVFISILDENDNPPEVDLPMSCVLITEYHELHERVASIVGKDADDPTTPNGRL 1232
Fly 1233 DFAITRGNKDGMFELRQI------------DAW---NAQIFAS---------------------- 1260
Fly 1261 --------KSLR-----------------------------------------NRYGN------- 1269
Fly 1270 --------YSLTITTRDMGLPANIVHNTLDICVSDFNDHAPVFVRPLHNTTVRIPENATVGTLIL 1326
Fly 1327 QAYASDGDMGQNALVRYRLKPDPLGSYKMFEVDGSTGELFLKEQLNREKQKIH-EIRIEAYDQGL 1390
Fly 1391 P--TSLSSDLDLTIYVRNVNDYEPQFMVNEISVNFTEHSDPGSERIKLPDTIDKDQLELDDPNDT 1453
Fly 1454 PSQVCYF---IVNGNEAGYFRLDP-----ETH------ILTVDRELDREVIANFTLYVRATENCR 1504
Fly 1505 NDSISGGEKRRRMGIEINNRLGGIVHNQQFGYDRFKHSRQLRSTESNEYGPEDAELLSYEAYD-- 1567
Fly 1568 -----------SSQEDP--------TGGLATTHPELDS-------------------TVIKVKVR 1594
Fly 1595 VLDINDNPPRFRSKIFTGGITTNADFGLKFMRVEATDADEGDNGRIGYYQVGEIRQTLSEGLENV 1659
Fly 1660 RKAPFLLDQETGEVQLNFDPQKGMKGYFDFVVLANDTSGMKDVAHVFIYLLREDQ------KVRF 1718
Fly 1719 VFRLQPDELRSRVDSFRDTLSNITESIVNIDEIKVHENKDGSVD--------------------- 1762
Fly 1763 --KTKTDLYMHLVEREDNSIYEVSEVLKLI-DSHIESLN---------------GLFKELNVLDT 1809
Fly 1810 QAAEAQLLTAGPSRGPLFVWLIFTNLFLATLLVVTIALCASQRNGYRRQLRAAKVNIFRGHSSMS 1874
Fly 1875 LQDAQEPATRVPNTNK--HSVQGSNPIWLKGYDNEWFKSEESGSIGG----HDSLDDNFLAVATQ 1933
Fly 1934 DMHETLKGTAKLFNNSNDLNRHFNLYNQIDKMTNNAQ--ILAR 1974 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cad88C | NP_731930.3 | Cadherin_repeat | 76..168 | CDD:206637 | 24/97 (25%) |
Cadherin_repeat | 179..276 | CDD:206637 | 33/112 (29%) | ||
Cadherin_repeat | 287..388 | CDD:206637 | 34/101 (34%) | ||
Cadherin_repeat | 397..506 | CDD:206637 | 38/217 (18%) | ||
Cadherin_repeat | 514..617 | CDD:206637 | 32/107 (30%) | ||
Cadherin_repeat | 625..742 | CDD:206637 | 35/119 (29%) | ||
Cadherin_repeat | 751..853 | CDD:206637 | 35/103 (34%) | ||
Cadherin_repeat | 865..976 | CDD:206637 | 31/112 (28%) | ||
Cadherin_repeat | 985..1080 | CDD:206637 | 30/97 (31%) | ||
Cadherin_repeat | 1090..1191 | CDD:206637 | 30/199 (15%) | ||
CA | 1221..1302 | CDD:214520 | 27/181 (15%) | ||
Cadherin_repeat | 1312..1409 | CDD:206637 | 30/99 (30%) | ||
Cadherin_repeat | 1418..>1502 | CDD:206637 | 23/97 (24%) | ||
Cadherin_repeat | 1617..1710 | CDD:206637 | 24/92 (26%) | ||
dchs1a | XP_002664697.2 | Cadherin_repeat | 45..135 | CDD:206637 | |
Cadherin_repeat | 145..247 | CDD:206637 | |||
Cadherin_repeat | 256..354 | CDD:206637 | |||
Cadherin_repeat | 370..464 | CDD:206637 | |||
Cadherin_repeat | 472..571 | CDD:206637 | |||
Cadherin_repeat | 580..678 | CDD:206637 | |||
Cadherin_repeat | 686..778 | CDD:206637 | |||
Cadherin_repeat | 791..886 | CDD:206637 | 2/5 (40%) | ||
Cadherin_repeat | 900..990 | CDD:206637 | 23/101 (23%) | ||
Cadherin_repeat | 1000..1105 | CDD:206637 | 33/116 (28%) | ||
Cadherin_repeat | 1118..1208 | CDD:206637 | 35/99 (35%) | ||
Cadherin_repeat | 1227..1311 | CDD:206637 | 17/83 (20%) | ||
Cadherin_repeat | 1331..1424 | CDD:206637 | 14/92 (15%) | ||
Cadherin_repeat | 1432..1535 | CDD:206637 | 32/107 (30%) | ||
Cadherin_repeat | 1544..1638 | CDD:206637 | 34/117 (29%) | ||
Cadherin_repeat | 1647..1741 | CDD:206637 | 36/106 (34%) | ||
Cadherin_repeat | 1750..1845 | CDD:206637 | 31/114 (27%) | ||
Cadherin_repeat | 1861..1950 | CDD:206637 | 28/90 (31%) | ||
Cadherin_repeat | 1958..2048 | CDD:206637 | 22/92 (24%) | ||
Cadherin_repeat | 2065..2157 | CDD:206637 | 6/91 (7%) | ||
Cadherin_repeat | 2166..2262 | CDD:206637 | 13/97 (13%) | ||
Cadherin_repeat | 2269..2362 | CDD:206637 | 14/95 (15%) | ||
Cadherin_repeat | 2371..2466 | CDD:206637 | 31/103 (30%) | ||
Cadherin_repeat | 2474..2583 | CDD:206637 | 25/132 (19%) | ||
Cadherin_repeat | 2591..2686 | CDD:206637 | 20/95 (21%) | ||
Cadherin_repeat | 2694..2790 | CDD:206637 | 27/104 (26%) | ||
Cadherin_repeat | 2802..2896 | CDD:206637 | 15/112 (13%) | ||
Cadherin_C | <3109..3156 | CDD:279398 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |