DRSC/TRiP Functional Genomics Resources

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Protein Alignment put and tgfbr1b

DIOPT Version :9

Sequence 1:NP_001262575.1 Gene:put / 41772 FlyBaseID:FBgn0003169 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001108531.1 Gene:tgfbr1b / 792928 ZFINID:ZDB-GENE-091027-1 Length:505 Species:Danio rerio


Alignment Length:439 Identity:152/439 - (34%)
Similarity:223/439 - (50%) Gaps:68/439 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 CVTSAEPRQGNIHFCCCKGSRCNSNQKYIKSTTEATTQVPKEKTQDGSNLIYIYIGTSVFSV--- 160
            |..|.:...| |:..||....||.:.. ||:....|.:.|.             :|...|:.   
Zfish    84 CAPSTKDDSG-IYPLCCDTDWCNKDPD-IKAFPVPTQKPPA-------------LGPVAFAALIA 133

  Fly   161 --------LMVIVGMGLLLYRRRKQAHFNEIPTHE-------------------AEITNSS---- 194
                    |||.|   ..:...|...| :.:|:.|                   .::|.|.    
Zfish   134 GPVCVLCFLMVTV---FYICHSRSVIH-HRVPSEEDPSLDHPFITVGTTLKDLIYDMTTSGSGSG 194

  Fly   195 -PLLSNRPIQ----LLEQKASGRFGDVWQAKLNNQDVAVKIFRMQEKESWTTEHDIYKLPRMRHP 254
             |||..|.|.    |.|....||||:||:.:...::||||||..:|:.||..|.:||:...:||.
Zfish   195 LPLLVQRTIARTIILQESIGKGRFGEVWRGRWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHE 259

  Fly   255 NILEFLGVEKHMDK---PEYWLISTYQHNGSLCDYLKSHTISWPELCRIAESMANGLAHLHEEIP 316
            |||.|:..: :.|.   .:.||:|.|..:|||.|||..:|::...:.:::.|.|:||||||.||.
Zfish   260 NILGFIAAD-NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLSLSTASGLAHLHMEIV 323

  Fly   317 ASKTDGLKPSIAHRDFKSKNVLLKSDLTACIADFGLAMIFQPGKPCGD--THGQVGTRRYMAPEV 379
            .  |.| ||:|||||.||||:|:|.:.|.||||.|||:.........|  .:.:|||:|||||||
Zfish   324 G--TQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEV 385

  Fly   380 LEGAINFNR-DAFLRIDVYACGLVLWEMVSRCDFAGPVGEFQLPFEAELGLRPSLDEVQESVVMK 443
            |:.:||... ::|.|.|:||.|||.||:.|||...|...::|||:...:...||::|::..|..:
Zfish   386 LDDSINMKHFESFKRADIYAMGLVFWEIASRCSIGGIHEDYQLPYHDLVQSDPSVEEMRRVVCEQ 450

  Fly   444 KLRPRLLNSWRAHPGLNVFCDTMEECWDHDAEARLSSSCVMERFAQLNK 492
            ||||.:.|.|::...|.|....|.|||..:..|||::..:.:..:||::
Zfish   451 KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
putNP_001262575.1 Activin_recp 38..126 CDD:279413 8/26 (31%)
STKc_ACVR2 206..493 CDD:270955 122/293 (42%)
S_TKc 210..479 CDD:214567 118/274 (43%)
tgfbr1bNP_001108531.1 Activin_recp 34..107 CDD:279413 8/23 (35%)
TGF_beta_GS 178..205 CDD:285687 7/26 (27%)
TyrKc 207..494 CDD:197581 121/290 (42%)
STKc_TGFbR1_ACVR1b_ACVR1c 211..498 CDD:271045 121/290 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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