DRSC/TRiP Functional Genomics Resources

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Protein Alignment put and tgfbr1a

DIOPT Version :10

Sequence 1:NP_001262575.1 Gene:put / 41772 FlyBaseID:FBgn0003169 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001032772.2 Gene:tgfbr1a / 560578 ZFINID:ZDB-GENE-051120-75 Length:500 Species:Danio rerio


Alignment Length:539 Identity:172/539 - (31%)
Similarity:257/539 - (47%) Gaps:102/539 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DLLYLTAQLTLVCCLIGIHGSILPGSHGII-ECEHFDEKMCNTTQQC-----------ETRIEHC 57
            |:..||::..|:..|:   .|:...:.|:: .||....:.||||..|           .|:...|
Zfish     7 DVASLTSRSLLLALLV---LSVTHEAQGLLCYCERCVNRSCNTTGLCFAVIAKSSGQTVTQERQC 68

  Fly    58 KMEADKFPSCYVLWSVNETTGILRIKMKGCFTDMHECNQTECVTSAEPRQGNIHFCCCKGSRCNS 122
            ..:.|.:|               |.:...|                .|.....|..||....||.
Zfish    69 IQQDDLYP---------------RDRPFQC----------------APSNNGKHPYCCNTHMCNK 102

  Fly   123 NQKYIKSTTEATTQVPKEKTQDGSNL---IYIYIGTSVFSVLMVIVGMGLLLY--RRRKQAHFNE 182
            |.|.|       .::|:.:.|..|.:   ..|.:...|.|.::|     ||.|  ..|...| :.
Zfish   103 NPKVI-------PELPEAEPQSMSPIALAAMIAVPICVLSFVLV-----LLFYMCHNRSIIH-HR 154

  Fly   183 IPTHE-------------------AEITNSS-----PLLSNRPIQ----LLEQKASGRFGDVWQA 219
            :|:.|                   .::|.|.     |||..|.|.    |.|....||||:||:.
Zfish   155 VPSEEDPTMDHPFLADGTTLKDLIYDMTTSGSGSGLPLLVQRTIARTIILQESIGKGRFGEVWRG 219

  Fly   220 KLNNQDVAVKIFRMQEKESWTTEHDIYKLPRMRHPNILEFLGVEKHMDK---PEYWLISTYQHNG 281
            :...::||||||..:|:.||..|.:||:...:||.|||.|:..: :.|.   .:.||:|.|..:|
Zfish   220 RWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD-NKDNGTWTQLWLVSDYHEHG 283

  Fly   282 SLCDYLKSHTISWPELCRIAESMANGLAHLHEEIPASKTDGLKPSIAHRDFKSKNVLLKSDLTAC 346
            ||.|||..:|::...:.:::.|.|:||||||.||..  |.| ||:|||||.||||:|:|.:.|.|
Zfish   284 SLFDYLNRYTVTVEGMIKLSLSTASGLAHLHMEIVG--TQG-KPAIAHRDLKSKNILVKKNGTCC 345

  Fly   347 IADFGLAMIFQPGKPCGD--THGQVGTRRYMAPEVLEGAINFNR-DAFLRIDVYACGLVLWEMVS 408
            |||.|||:.........|  .:.:|||:||||||||:.:||... ::|.|.|:||.|||.||:..
Zfish   346 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMRHFESFKRADIYALGLVFWEIAR 410

  Fly   409 RCDFAGPVGEFQLPFEAELGLRPSLDEVQESVVMKKLRPRLLNSWRAHPGLNVFCDTMEECWDHD 473
            ||...|...::|||:...:...||:::::..|..:||||.:.|.|::...|.|....|.|||..:
Zfish   411 RCSIGGIHEDYQLPYYDLVPSDPSVEDMKRVVCDQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 475

  Fly   474 AEARLSSSCVMERFAQLNK 492
            ..|||::..|.:..:||::
Zfish   476 GGARLTALRVKKSLSQLSQ 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
putNP_001262575.1 TFP_LU_ECD_ACVR2 33..125 CDD:467135 20/103 (19%)
STKc_ACVR2 206..493 CDD:270955 121/293 (41%)
tgfbr1aNP_001032772.2 TFP_LU_ECD_ALK5 32..102 CDD:467067 18/100 (18%)
Psg1 <101..154 CDD:464218 16/65 (25%)
TGF_beta_GS 173..200 CDD:462503 7/26 (27%)
STKc_TGFbR1_ACVR1b_ACVR1c 206..493 CDD:271045 120/290 (41%)

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