DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment put and babo

DIOPT Version :9

Sequence 1:NP_001262575.1 Gene:put / 41772 FlyBaseID:FBgn0003169 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster


Alignment Length:534 Identity:163/534 - (30%)
Similarity:250/534 - (46%) Gaps:103/534 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IECEHFD-----EKMCNTTQQCETRIE-----------HCKMEADKFPSCYVLWSVNETTGILRI 82
            |:| |.|     ..:|.|...|.|.:|           .|..::..||....:|           
  Fly   127 IKC-HCDTCKESNNICETDGFCFTSVEKNSDGSIIFSYRCLHKSQIFPPGRSIW----------- 179

  Fly    83 KMKGCFTDMHECNQTECVTSAEP--RQGNIHFCCCKGSRCNSNQKYIKSTTEATTQVPKEKTQDG 145
                |...:|.      ..:|.|  |.| .|.||.....||      :.....|.....::.::|
  Fly   180 ----CNDGLHG------GPTARPVGRNG-AHACCKDRDFCN------RFLWPKTKDQRSDRVEEG 227

  Fly   146 SNL-IYIYIGTSVFSVLMVIVGMGLLLY-------------RRRKQAHFNEIPTHEA-------- 188
            ..: :..|:...:.|...|.:.:|..|:             ||::.|........::        
  Fly   228 RQISVQDYVPHRLTSWEFVAIILGATLFICFTGTSTWYYCQRRKRMASGRTFAKEDSAYDPILNG 292

  Fly   189 --------EITNSS------PLLSNRPI----QLLEQKASGRFGDVWQAKLNNQDVAVKIFRMQE 235
                    |:|.|.      |||..|.|    ||......||||:||:.:...::||||||..:|
  Fly   293 NTTIHDIIEMTTSGSGSAGLPLLVQRSIARQVQLCHVIGKGRFGEVWRGRWRGENVAVKIFSSRE 357

  Fly   236 KESWTTEHDIYKLPRMRHPNILEFLGVEKHMDK---PEYWLISTYQHNGSLCDYLKSHTISWPEL 297
            :.||..|.:||:...:||.|||.|:..: :.|.   .:.||::.|..||||.|||.:|.:....:
  Fly   358 ECSWFREAEIYQTVMLRHENILGFIAAD-NKDNGTWTQLWLVTDYHENGSLFDYLTTHPVDTNTM 421

  Fly   298 CRIAESMANGLAHLHEEIPASKTDGLKPSIAHRDFKSKNVLLKSDLTACIADFGLAMIFQPGKPC 362
            ..::.|:|.||||||.:|..::.   ||:|||||.||||:|:||:|:..|.|.|||:........
  Fly   422 LNMSLSIATGLAHLHMDIVGTRG---KPAIAHRDLKSKNILVKSNLSCAIGDLGLAVRHVEKNDS 483

  Fly   363 GD---THGQVGTRRYMAPEVLEGAINFNR-DAFLRIDVYACGLVLWEMVSRCDFAGPVGEFQLPF 423
            .|   || :|||:||||||||:.::|... |::.|.||||.||:|||:..||:......|:|||:
  Fly   484 VDIPSTH-RVGTKRYMAPEVLDESMNDQHFDSYKRADVYAFGLILWEIARRCNMGMIYDEYQLPY 547

  Fly   424 EAELGLRPSLDEVQESVVMKKLRPRLLNSWRAHPGLNVFCDTMEECWDHDAEARLSSSCVMERFA 488
            ...:...||::|:::.|.::|.||.:.|.|.|...|:.....|:|||..:..|||::..:.:..|
  Fly   548 YDVVQPDPSIEEMKKVVCIEKCRPNIPNRWHASDVLHNMAKVMKECWYPNPVARLTALRIKKTLA 612

  Fly   489 QLNKYPSTQLLIKN 502
            .:    |.:..:||
  Fly   613 SI----SVEDKVKN 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
putNP_001262575.1 Activin_recp 38..126 CDD:279413 22/105 (21%)
STKc_ACVR2 206..493 CDD:270955 116/293 (40%)
S_TKc 210..479 CDD:214567 114/275 (41%)
baboNP_476999.1 Activin_recp 127..214 CDD:279413 24/115 (21%)
GS 294..324 CDD:197743 8/29 (28%)
Pkinase_Tyr 324..611 CDD:285015 117/291 (40%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 116/295 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445036
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23255
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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