DRSC/TRiP Functional Genomics Resources

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Protein Alignment put and tgfbr2b

DIOPT Version :9

Sequence 1:NP_001262575.1 Gene:put / 41772 FlyBaseID:FBgn0003169 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_878275.2 Gene:tgfbr2b / 30739 ZFINID:ZDB-GENE-980526-375 Length:556 Species:Danio rerio


Alignment Length:578 Identity:174/578 - (30%)
Similarity:268/578 - (46%) Gaps:104/578 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKYDLLYLTAQLTLVCCLIGIHGSILPGSHGIIE-------CEHFD--EKMCNTTQQCETRIEH 56
            |.:|.|..|.....|:..::...|  :.|::....       |:..|  |..||....||:   :
Zfish     1 MERYQLSVLCWWTFLISTVVDWRG--VDGNNPFYRPYRIPQLCKFCDVLESNCNGKDTCES---N 60

  Fly    57 CKMEA-----DKFPSCYVLWSVNETTGILR-------IKMKGCFTDMHECNQTEC-VTSAEPRQG 108
            |.:.:     |:.  |..:|..::....:.       :.:.|...:.:  |.|:| :.......|
Zfish    61 CSITSICESPDEI--CVAIWRQSDDNNTIETLCHNPTVPLYGIMVENN--NNTKCEMKKRISNSG 121

  Fly   109 NIHFCCCKGSRCNSNQKYIKSTTEATTQVPKEKTQDGSNLIYIYIGTSVFSVLMVIVGMGLLLYR 173
            ..|.|.|....||....:...|......|          ::...:...|.:||::.......|||
Zfish   122 PFHICSCNEVECNDMLLFKLPTNNQVVLV----------ILVSLLPLLVLAVLVIASFYWYRLYR 176

  Fly   174 RRKQAHF------------------------------NEIPTHEAEIT-NSSPLLSNRPIQLLEQ 207
            |||...:                              :...||...|. |..||    ||:|..|
Zfish   177 RRKLDEWETKKPSKHKGPKGALDCSDACAIMMDDDRSDSSSTHANNINHNMDPL----PIELDLQ 237

  Fly   208 KASGRFGDVWQAKLNN------QDVAVKIFRMQEKESWTTEHDIYKLPRMRHPNILEFLGVEKHM 266
            ...|||.:|::|||..      :.||||||..:|..||..|.||::...::|.|||.||..|:..
Zfish   238 VGKGRFAEVYKAKLRQSPSEQFETVAVKIFPYEEYASWKNEKDIFQDIDLKHENILHFLTAEERK 302

  Fly   267 DKPEYWLISTYQHNGSLCDYLKSHTISWPELCRIAESMANGLAHLH-EEIPASKTDGLKPSIAHR 330
            .:.:||||:.:...|:|.:||..|.:||.:|..:..|:|:|:|||| :..|..:.   |..|.||
Zfish   303 VEKQYWLITAFHPRGNLQEYLMRHLLSWEDLRLLGSSLASGVAHLHSDHTPCGRP---KVPIVHR 364

  Fly   331 DFKSKNVLLKSDLTACIADFGLAMIFQPGKPCGD--THGQVGTRRYMAPEVLEGAINF-NRDAFL 392
            |.||.|:|:|:|||.|:.||||.:.........:  ..|||||.|||||||||..||. |.::|.
Zfish   365 DLKSSNILVKNDLTCCLCDFGLGLRLDNSLSVDELANSGQVGTARYMAPEVLESRINLENIESFK 429

  Fly   393 RIDVYACGLVLWEMVSRCDFAGPVGEFQLPFEAELGLRPSLDEVQESVVMKKLRPRLLNSWRAHP 457
            :.|||:..|||||:.|||:..|.|.:::.||.:::...|.::.::::|:..:.||.:.:||..|.
Zfish   430 QTDVYSMALVLWEITSRCNAIGEVKDYEPPFGSKVREHPCVESMKDNVLRDRGRPEIPSSWMKHQ 494

  Fly   458 GLNVFCDTMEECWDHDAEARLSSSCVMERFAQLNKYPSTQLLIKNHTNIDDAKESTNC 515
            |:...|.|:.||||||.||||::.||.|||.:::               ||..:.:.|
Zfish   495 GVAAVCATINECWDHDPEARLTAQCVAERFNEMD---------------DDLDKLSTC 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
putNP_001262575.1 Activin_recp 38..126 CDD:279413 20/102 (20%)
STKc_ACVR2 206..493 CDD:270955 123/296 (42%)
S_TKc 210..479 CDD:214567 116/278 (42%)
tgfbr2bNP_878275.2 ecTbetaR2 39..139 CDD:286061 21/106 (20%)
STYKc 232..520 CDD:214568 120/290 (41%)
STKc_TGFbR2_like 237..528 CDD:270957 123/293 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG3653
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23255
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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