DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment put and Amhr2

DIOPT Version :9

Sequence 1:NP_001262575.1 Gene:put / 41772 FlyBaseID:FBgn0003169 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_112260.1 Gene:Amhr2 / 29530 RGDID:70964 Length:557 Species:Rattus norvegicus


Alignment Length:521 Identity:158/521 - (30%)
Similarity:235/521 - (45%) Gaps:89/521 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GIHGSIL---------PGSHGIIECEHFDEKMCNTTQQCETRIEHCKMEADKFPSCYVLWSVNET 76
            |:.||..         ||....|.|.:                .||         |:.:|  |.|
  Rat    31 GVRGSTKTLGEVVDAGPGPPKGIRCLY----------------SHC---------CFGIW--NLT 68

  Fly    77 TGILRIKMKGCF-TDMHECNQTEC--VTSAEPRQGNIHF-CCCKGSRCNSNQKYIKSTTEATTQV 137
            .|..:::|:||. :|...|....|  |..|.|...:..| |.|....||:|..::..:.......
  Rat    69 HGRAQVEMQGCLDSDEPGCESLHCDPVPRAHPSPSSTLFTCSCGTDFCNANYSHLPPSGNRGAPG 133

  Fly   138 PKE-KTQDGSNLIYIYIGTSVFSVLMVIVGMGLLLYRRRKQAHFNEIPTHE----AEITNSSPLL 197
            |:| :...|..:....:...||.||::.:.:..||.|:..:......|..|    .:.:...|.|
  Rat   134 PQEPQATPGGPIWMAQLLLGVFLVLLLSIIILALLQRKACRVQGGSDPEPEPGSGGDCSEELPEL 198

  Fly   198 SN-RPIQLLEQKASGRFGDVWQAKLNNQDVAVKIFRMQEKESWTTEHDIYKLPRMRHPNILEFL- 260
            :. |..|::::   |....||..:|..:.||:|.|..:....:..|..:|:|..::|.:|:.|: 
  Rat   199 AELRFSQVIQE---GGHAVVWAGRLQGEMVAIKAFPPRAVAQFRAERAVYQLLGLQHNHIVRFIT 260

  Fly   261 ---GVEKHMDKPEYWLISTYQHNGSLCDYLKSHTISWPELCRIAESMANGLAHLHEEIPASKTDG 322
               |....:......::..|. .||||.||..:|..|....|:|.|:|.|||.||.|   ...||
  Rat   261 AGQGGPGPLPSGPLLVLELYP-KGSLCHYLTQYTSDWGSSLRMALSLAEGLAFLHGE---RWQDG 321

  Fly   323 -LKPSIAHRDFKSKNVLLKSDLTACIADFGLAMIF------------QPGKPCGDTHGQVGTRRY 374
             .||.|||||..|:|||::.|.:..|.|.|||::.            ||..|....  :.||:||
  Rat   322 QYKPGIAHRDLSSQNVLIREDRSCAIGDLGLALVLPGLAQPPALAPTQPRGPAAIL--EAGTQRY 384

  Fly   375 MAPEVLEGAINFN--RDAFLRIDVYACGLVLWEMVSRC-----DFAGPVGEFQLPFEAELGLRPS 432
            ||||:|:..::..  ..|..|.|||:..|:|||::|||     |...|  .|||.:|||||..||
  Rat   385 MAPELLDKTLDLQDWGTALQRADVYSLALLLWEILSRCSDLRPDHRPP--PFQLAYEAELGSNPS 447

  Fly   433 LDEVQESVVMKKLRPRLLNSWRAHP----GLNVFCDTMEECWDHDAEARLSSSCVMERFAQLNKY 493
            ..|:....|.::.||.:.:||....    ||.   :.:|:|||.|.||||::.||.:|.|.| .|
  Rat   448 ACELWALAVAERKRPNIPSSWSCSATDPRGLR---ELLEDCWDADPEARLTAECVQQRLAAL-AY 508

  Fly   494 P 494
            |
  Rat   509 P 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
putNP_001262575.1 Activin_recp 38..126 CDD:279413 22/91 (24%)
STKc_ACVR2 206..493 CDD:270955 111/314 (35%)
S_TKc 210..479 CDD:214567 105/296 (35%)
Amhr2NP_112260.1 Activin_recp <61..119 CDD:395845 19/59 (32%)
PKc_like 205..506 CDD:419665 111/314 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG3653
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D191771at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23255
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.