DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment put and Acvr1c

DIOPT Version :9

Sequence 1:NP_001262575.1 Gene:put / 41772 FlyBaseID:FBgn0003169 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001104500.1 Gene:Acvr1c / 269275 MGIID:2661081 Length:493 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
putNP_001262575.1 Activin_recp 38..126 CDD:279413
STKc_ACVR2 206..493 CDD:270955
S_TKc 210..479 CDD:214567
Acvr1cNP_001104500.1 Activin_recp 27..100 CDD:279413
TGF_beta_GS 166..193 CDD:285687
Pkinase_Tyr 195..474 CDD:285015
STKc_TGFbR1_ACVR1b_ACVR1c 199..486 CDD:271045
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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