DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment put and Amhr2

DIOPT Version :9

Sequence 1:NP_001262575.1 Gene:put / 41772 FlyBaseID:FBgn0003169 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001343504.1 Gene:Amhr2 / 110542 MGIID:105062 Length:568 Species:Mus musculus


Alignment Length:519 Identity:158/519 - (30%)
Similarity:236/519 - (45%) Gaps:87/519 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GIHGSIL---------PGSHGIIECEHFDEKMCNTTQQCETRIEHCKMEADKFPSCYVLWSVNET 76
            |:.||..         ||....|.|.:                .||         |:.:|  |.|
Mouse    31 GVRGSTKTLGEMVDAGPGPPKGIRCLY----------------SHC---------CFGIW--NLT 68

  Fly    77 TGILRIKMKGC-FTDMHECNQTEC--VTSAEPRQGNIHF-CCCKGSRCNSNQKYIKSTTEATTQV 137
            .|..:::|:|| .:|...|....|  |..|.|...:..| |.|....||:|..::..:.......
Mouse    69 HGRAQVEMQGCRDSDEPGCESLHCDPVPRAHPNPSSTLFTCSCGTDFCNANYSHLPPSGNQGAPG 133

  Fly   138 PKE-KTQDGSNLIYIYIGTSVFSVLMVIVGMGLLLYRR--RKQAHFNEIPTHEAEITNSSPLLSN 199
            |:| :...|..:....:...:|.||::...:..||.|:  |.|...:..|....:.:...|.|:.
Mouse   134 PQEPQATPGGPVWMALLLLGMFLVLLLSSIILALLQRKACRVQGGSDPEPGSGGDCSEELPELAE 198

  Fly   200 -RPIQLLEQKASGRFGDVWQAKLNNQDVAVKIFRMQEKESWTTEHDIYKLPRMRHPNILEFL--- 260
             |..|::::   |....||..:|..:.||:|.|..:....:..|..:|:|..::|.:|:.|:   
Mouse   199 LRFSQVIQE---GGHAVVWAGRLQGEMVAIKAFPPRAVAQFRAERAVYQLLGLQHDHIVRFITAG 260

  Fly   261 -GVEKHMDKPEYWLISTYQHNGSLCDYLKSHTISWPELCRIAESMANGLAHLHEEIPASKTDG-L 323
             |....:......::..|. .||||.||..:|..|....|:|.|:|.|||.||||   ...|| .
Mouse   261 QGGPGPLPSGPLLVLELYP-KGSLCHYLTQYTSDWGSSLRMALSLAEGLAFLHEE---RWQDGQY 321

  Fly   324 KPSIAHRDFKSKNVLLKSDLTACIADFGLAMIF------------QPGKPCGDTHGQVGTRRYMA 376
            ||.|||||..|:|||::.|.:..|.|.|||::.            ||..|....  :.||:||||
Mouse   322 KPGIAHRDLSSQNVLIREDRSCAIGDLGLALVLPGLAQPPALAPTQPRGPAAIL--EAGTQRYMA 384

  Fly   377 PEVLEGAINFN--RDAFLRIDVYACGLVLWEMVSRC-----DFAGPVGEFQLPFEAELGLRPSLD 434
            ||:|:..::..  ..|..|.|||:..|:|||::|||     |...|  .|||.:|||||..||..
Mouse   385 PELLDKTLDLQDWGTALQRADVYSLALLLWEILSRCSDLRPDHRPP--PFQLAYEAELGSNPSAC 447

  Fly   435 EVQESVVMKKLRPRLLNSWRAHP----GLNVFCDTMEECWDHDAEARLSSSCVMERFAQLNKYP 494
            |:....|.::.||.:.::|....    ||.   :.:|:|||.|.||||::.||.:|.|.| .||
Mouse   448 ELWALAVEERKRPNIPSTWSCSATDPRGLR---ELLEDCWDADPEARLTAECVQQRLAAL-AYP 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
putNP_001262575.1 Activin_recp 38..126 CDD:279413 22/91 (24%)
STKc_ACVR2 206..493 CDD:270955 111/314 (35%)
S_TKc 210..479 CDD:214567 105/296 (35%)
Amhr2NP_001343504.1 Activin_recp <61..119 CDD:307282 19/59 (32%)
PKc_like 203..504 CDD:328722 111/314 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG3653
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D191771at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23255
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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