DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment put and amhr2

DIOPT Version :9

Sequence 1:NP_001262575.1 Gene:put / 41772 FlyBaseID:FBgn0003169 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_031753061.1 Gene:amhr2 / 100498418 XenbaseID:XB-GENE-486737 Length:525 Species:Xenopus tropicalis


Alignment Length:553 Identity:165/553 - (29%)
Similarity:249/553 - (45%) Gaps:114/553 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LYLTAQLTL-VCCLIGIHGSILPGSHGIIE--CEHFDEKMCNTTQQCETRIEHCKMEADKFPSCY 68
            |.|::.||| |..|.||..::...|...:.  ..:|.|..           |..|:...:...|.
 Frog    13 LLLSSALTLPVVHLEGITCALYENSSSSVSFPVSNFGELQ-----------EPGKIYCKESNCCV 66

  Fly    69 VLWSVNETTGILRIKMKGCFTDMHECNQTECVTSAEP-RQGNIHFCCCKGSRCNSN----QKYIK 128
            .|||:  .:|.|:..:.||:.....|....|    .| |..:.:.|.|....||:|    |:.|.
 Frog    67 GLWSL--FSGELQPLILGCYPKNAVCRSALC----NPVRIQSQYHCFCSSDNCNANITLPQQPIS 125

  Fly   129 ST----------------TEATTQVPKEKTQDGSNLIYIYIGTSVFSVLMVIVGMGLLLYRR--- 174
            ..                .||..:.|: .....|:..|:|:.| :|.:|.|:..:.::|.:|   
 Frog   126 PAQAELEGCAHWNVSCDWMEAAREQPR-NASSFSDYTYVYVAT-IFLILCVLCVIIIVLRKRIHT 188

  Fly   175 ----RKQAHFNEIPTHEAEITNSSPLLSNRPIQLLE---------QKASGRFGDVWQAKLNNQDV 226
                |::....|:.|...|..|:.|......:.:|:         |.:.|.|        :.::|
 Frog   189 DLFIRRRGEEQELQTVIKEERNTPPTTQVDGLTILQALKEDSLSVQLSLGNF--------HGRNV 245

  Fly   227 AVKIFRMQEKESWTTEHDIYK-LPRMRHPNIL--------EFLGVEKHMDKPEYWLISTYQHNGS 282
            .:|.|....:|.:..|:.|.. |..:.|.||:        .||       |..|.|:..:...||
 Frog   246 VIKCFPPALREQYKQEYRILSLLTSLHHKNIVCLIKAGSSSFL-------KEHYLLVLQHYPRGS 303

  Fly   283 LCDYLKSHTISWPELCRIAESMANGLAHLHEEIPASKTDGLKPSIAHRDFKSKNVLLKSDLTACI 347
            |..||...|.:|...|::|.|:|.|||.||.:|  .|.|..||.|||||..|:|:|:.:|....|
 Frog   304 LRSYLIHCTTNWTTACQMATSLAKGLAFLHADI--WKEDVYKPPIAHRDLSSENILVTADSLCVI 366

  Fly   348 ADFGLAMIFQPGK--------PCGDTHGQVGTRRYMAPEVLEGAINFN--RDAFLRIDVYACGLV 402
            :||||:::.:..|        |   .....||.|||:||:|:|::|..  ..|..:.|||:.||:
 Frog   367 SDFGLSVVLEGQKIMKRNTEDP---AISMTGTLRYMSPEMLDGSLNLVLWELALTQADVYSLGLL 428

  Fly   403 LWEMVSRC-----DFAGPVGEFQLPFEAELGLRPSLDEVQESVVMKKLRPRLLNSWRAHPGLNV- 461
            |||:.|||     |...|  |||:.|..|||..|:|.|:|..:|..|.||:|..||    |.|: 
 Frog   429 LWEIFSRCYDLYADQCAP--EFQVVFLEELGPNPTLHELQSLIVENKRRPQLPKSW----GNNIK 487

  Fly   462 ----FCDTMEECWDHDAEARLSSSCVMERFAQL 490
                ..:|:|:|||.|:||||::.|..||.:.|
 Frog   488 LVGALWETLEDCWDPDSEARLTAQCAEERLSNL 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
putNP_001262575.1 Activin_recp 38..126 CDD:279413 22/92 (24%)
STKc_ACVR2 206..493 CDD:270955 113/323 (35%)
S_TKc 210..479 CDD:214567 107/297 (36%)
amhr2XP_031753061.1 PKc_like 238..520 CDD:419665 111/307 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D191771at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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