DRSC/TRiP Functional Genomics Resources

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Protein Alignment stumps and Pik3ap1

DIOPT Version :9

Sequence 1:NP_731923.2 Gene:stumps / 41770 FlyBaseID:FBgn0020299 Length:1220 Species:Drosophila melanogaster
Sequence 2:XP_038965054.1 Gene:Pik3ap1 / 294048 RGDID:1307744 Length:896 Species:Rattus norvegicus


Alignment Length:1069 Identity:234/1069 - (21%)
Similarity:383/1069 - (35%) Gaps:304/1069 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 SASGFLGSPGYNMDDILIITAKHSERAYLRATFLKNHFDKITKQRGRKPFNFLHIKIDDGPFSEE 300
            :|||:    |:.. ||||..:..:|.   ...:|::.|....:.|.:|...:.  .:.|..||.:
  Rat     2 AASGW----GWGC-DILIFYSPDAEE---WCQYLQDLFVSCRQVRSQKIQTYR--LVPDACFSSQ 56

  Fly   301 IAHKYQNTALQIVILCPALLALPHSFLMTQLSAIIR-----VEKVLAILLDVSEEKVKEMHKSAL 360
            ....:::....:|:|...|:   ..|:...|..:::     .::|:.:|..|...  .|..::..
  Rat    57 DLSVFRDARCVLVLLSAGLV---ECFVQPGLLPVLQRACHPPQRVVRLLCGVQPN--DEDFQAFF 116

  Fly   361 PSYYKWRRCVVRDNDQVQISNILGIATDILG------------RALCQRP-------PCQDSSGG 406
            |.:..|:.....|..:..::.:....::..|            |||   |       |.:.|.| 
  Rat   117 PDWAHWQELTCDDEPETYLAAVRKAISEDSGCDSVTDTEPEDERAL---PFSKHTDLPLETSPG- 177

  Fly   407 GGGGLSRSFSSCTEGFTVLPKKVKLGQNKVVALLAEPLEKNDTLKLQVEKSGE---LIELRNFKC 468
                         ....|.|.:::.|....|.::.. .:.::.:..:||.|.|   .:.:.. ..
  Rat   178 -------------NLMVVQPDRIRCGAETTVYVIVR-CKLDEKVSTEVEFSPEDSPSVRMEG-TL 227

  Fly   469 RNPYTLQFNIPEACMEISTMIEIRIEKNNKSLGARPIKCESRLRELEQLLRIEDSPIEFMCHALG 533
            .|.||:....|:..   |..:.:::...:..:....|...:.:.|:..||....:|:||||.|..
  Rat   228 ENEYTVSVKAPDLS---SGNVSLKVYSGDLVVCETTISYYTDMEEIGNLLSSAANPVEFMCQAFK 289

  Fly   534 IGPVERDALDQHLLQCFQRNMPPN-FHLLSGPSERQPHFFTRLESSPEEYPTLLHFAARWGLNRL 597
            |.|...:.||:.|.:..:.|:|.: .||.......:....|  ....||.||||||||::||..|
  Rat   290 IVPYNTETLDKLLTESLKNNIPASGLHLFGINQLEEDDMMT--NQRDEELPTLLHFAAKYGLKNL 352

  Fly   598 CIQLMECPGGDTACGVRNCAGRTPAELAEQEGHHKLAQNIVSFAEFHEL---------------- 646
            ...|:.|||...|..|.|..|..|..:||:.|...|.|.|..:.|..::                
  Rat   353 TALLLTCPGALQAYSVANKHGHYPNTIAEKHGFRDLRQFIDEYVETVDMLKSHIKEELMQGEEAD 417

  Fly   647 ---TTMYH-----YFKGVTPPG------ES----CPKPSANVVIE------AHPVKAGKTNKPPK 687
               .:|.|     ..|....||      ||    .|..:.::.:|      .:||.....::|.|
  Rat   418 DVYESMAHLSTDLLMKCSLNPGCDDELYESMAAFAPAATEDLYVEMLQASAGNPVSGESFSRPTK 482

  Fly   688 ELPTAEYMEMSS----GSERENTPEVRTKTETLAISNLNYISVETEDENLQASVAEKKVESEKKL 748
            :....:::|.:|    ..|||..|   ...|.|      |.:|| |||.....:|.:......: 
  Rat   483 DSMIRKFLEGNSMKLASLEREQHP---PHGEEL------YHTVE-EDETFSVDLANRPPVPVPR- 536

  Fly   749 PEAGNQPGPEKTTNELRINEPPYYQSK---EQNQQPKELKNQSKSLDEVDAAPLYQTDKFSQECS 810
            ||. :.|||    :.|..|||  |.||   |::|:                              
  Rat   537 PET-STPGP----HPLPDNEP--YISKVFAEKSQE------------------------------ 564

  Fly   811 QLLENQLGNDYVLQPSNVPVAQDDGNYLFQPSNRPVEEPLRLNRCTNRQPGYGTLKRSASDASAA 875
                 ::||.||   |:..:.::           |:..|.|     :|.|.      |..|..|.
  Rat   565 -----RVGNFYV---SSESIRKE-----------PLVRPWR-----DRPPS------SIYDPFAG 599

  Fly   876 SHTRSNADDELAEIMHDFKNNVLSIRDVEVLVERWK-HRNDVQQSFREKQDQIDQLRREYERIQ- 938
            ..|....  :|..:....|..::::.:..:..:.|: ::....:|||.:|:.:.:||....|.| 
  Rat   600 MKTPGQR--QLITLQEQVKLGIVNVDEAVLHFKEWQLNQKKRSESFRFQQENLKRLRDSITRRQR 662

  Fly   939 EQVKS----------------HLKRETPF------ERIKKFFLRSKTPGGNDSLLDETKSSIATS 981
            |:.||                ||..:..|      .|...|..|::...| |...|.| ||.|:|
  Rat   663 EKQKSGKHADLEITVPIRHSQHLPGKVEFGVYESGPRKSVFPARTELRRG-DWKTDST-SSTASS 725

  Fly   982 CSFKSAGGVSSSAGAGRPISSLSLQSVSSSSSSSGRLSTGSNCSGASLGDSGTHSDHEDRRFPHC 1046
            .|.:|              |:.||.|||                      ||...|:||...|..
  Rat   726 TSNRS--------------STRSLLSVS----------------------SGMEGDNEDNEVPEI 754

  Fly  1047 RMMDNYMVPPTP-----RPVFTPSSTPGDERHQIVFPS-----------PMSSCQRLNTP-TSPT 1094
            .....    |.|     .||.|.:.....||...|.|.           |:.:.:|..:| |..|
  Rat   755 TRSRG----PGPTQVDGAPVVTGTPVGILERPPRVPPRAASQSTACVQVPLEARRRHCSPGTGLT 815

  Fly  1095 GSEHYQMFPSNI-PVYGSQPLVGSQSSN---YLNTIM--EAKEQAETQHYQNQNGVTLQPIKLNE 1153
            ||:....||:.: .:..|:.|.|...:|   .:|:|:  .|.|...:....|.            
  Rat   816 GSDTASSFPTLVTSLTSSKALCGRHLANIYSQINSILVYAAPELHSSVMASNP------------ 868

  Fly  1154 RSNIIYGKLTKSSSASGCSSFKPKQIPVP 1182
                  |.|..||||   ||.:...||.|
  Rat   869 ------GALPSSSSA---SSTQRSLIPPP 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stumpsNP_731923.2 DBB 423..562 CDD:291229 32/142 (23%)
Pik3ap1XP_038965054.1 TIR_3 11..142 CDD:408351 24/140 (17%)
DBB 181..319 CDD:405266 32/142 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352179
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JV2
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008315
OrthoInspector 1 1.000 - - oto97363
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16267
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6297
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.840

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