DRSC/TRiP Functional Genomics Resources

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Protein Alignment stumps and bank1

DIOPT Version :10

Sequence 1:NP_731923.2 Gene:stumps / 41770 FlyBaseID:FBgn0020299 Length:1220 Species:Drosophila melanogaster
Sequence 2:XP_031758988.1 Gene:bank1 / 100486225 XenbaseID:XB-GENE-952296 Length:1051 Species:Xenopus tropicalis


Alignment Length:552 Identity:118/552 - (21%)
Similarity:193/552 - (34%) Gaps:166/552 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 LLAEPLEKND------TLKLQVEKSGELIELRNFKCRNPYTLQFNIPEACMEISTMIEIRIE--- 494
            ||..|:|..|      |.|........|:..:..:|.||..:...:.|   ||.|..::.||   
 Frog   146 LLDSPMEDEDFKSRESTKKTNSTVPSALVLPQRIQCENPKEIVIVLTE---EIPTTSKVEIEFCT 207

  Fly   495 -----------KNNKSLGARPIK-----------CESRLR------------ELEQLLRIEDSPI 525
                       .|.|.|..:.::           ||..:|            |||.:||....||
 Frog   208 ENQLIRREATQWNEKVLSLKALEFPAGSVTVNVCCEDVIRASTEIEYYTLTGELELMLRKVVDPI 272

  Fly   526 EFMCHALGIGPVERDALDQHLLQCFQRNMPP---NFHLLSGPSERQPHFFTRLESSPEEYPTLLH 587
            .|:|.|..:..:|  .||..|::..:..|..   |.|.::..:          .::.||.|||||
 Frog   273 AFICQAFNVYSIE--DLDMVLMKSLRNRMSSCEFNLHEINQCT----------NANIEEIPTLLH 325

  Fly   588 FAARWGLNRLCIQLMECPGGDTACGVRNCAGRTPAELAEQEGH-------HKLAQNIVSFAEFHE 645
            .||::||..:.|.||||||.|....:.|..|..||.:|::.||       |||:|.:.:.|.   
 Frog   326 CAAKFGLKEVTILLMECPGADRILNITNKYGEDPATIADKHGHREIKEIIHKLSQKVNAKAS--- 387

  Fly   646 LTTMYHYFKGVTPPGESCPKPSANVVIEAHPVKAGKTNKPPKELPTAEYMEMSSGSERE------ 704
                               .|...:.:|...|                |::|...:|.:      
 Frog   388 -------------------DPQERIELEQEDV----------------YVDMVINAEAQHGEESI 417

  Fly   705 ----NTPEVRTKTETLAISNLNYISVETEDENL----QASVAEKKVESEK---KLPEAGNQPGPE 758
                |..:.....|.|::.::.....|.|:|:|    :.|.:|:...::.   ..| ||.:.||.
 Frog   418 DDIMNENQNNVLEEGLSVQSMQDYKEEEEEESLFHFQEDSFSEELNVNDDYCFSFP-AGCESGPF 481

  Fly   759 KTTNELRI-NEPPYYQSKE-------------QNQQPKELKNQSKSLDEVDAAPLYQTDKFSQE- 808
            :..||.:| .:....|.|:             :|:..|::..|...|...:.....|....|:| 
 Frog   482 EKENEYKILQDQQGCQDKDDQVYLDDSAYEDLENKYKKDVHPQRSELAVENIYTSMQQSTISEES 546

  Fly   809 ------------CS-----QLLENQLGNDYVLQPSNVPVAQDDGNYLFQPSNRPVEEPLRLNRCT 856
                        ||     |..:..:..:.:|..:.....|.:....|.|.:....||..:..  
 Frog   547 IMMYNESFAVTICSSESAPQTFQEAMNEENILNLTEEKEKQREQQGTFSPYSPLPPEPSFIEE-- 609

  Fly   857 NRQPGYGTLKRSASDASAASHTRSNADDELAE 888
                    .:...:|....||....|::|..|
 Frog   610 --------EEEDDNDDDNVSHIAQGAEEECNE 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stumpsNP_731923.2 DBB 423..562 CDD:464205 40/168 (24%)
bank1XP_031758988.1 TIR_3 9..128 CDD:436583
DBB 173..306 CDD:464205 31/137 (23%)
ANKYR <322..426 CDD:440430 35/141 (25%)
ANK repeat 322..353 CDD:293786 16/30 (53%)
ANK repeat 355..386 CDD:293786 10/30 (33%)
Blue background indicates that the domain is not in the aligned region.

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