DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7987 and Sry-delta

DIOPT Version :9

Sequence 1:NP_650375.1 Gene:CG7987 / 41768 FlyBaseID:FBgn0038244 Length:1283 Species:Drosophila melanogaster
Sequence 2:NP_524581.1 Gene:Sry-delta / 43572 FlyBaseID:FBgn0003512 Length:433 Species:Drosophila melanogaster


Alignment Length:343 Identity:84/343 - (24%)
Similarity:127/343 - (37%) Gaps:66/343 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 EESNSEYDPASAEESGSESEADEQLYGEFYCNECGISFHRQDLLRRHAKMHCKPSDQAAVGSNSD 458
            |||::|......:|...|.:.|:.   ||.|.:..:.                 ..:|..|.:||
  Fly   138 EESDTEIKREFVDEEEEEDDDDDD---EFICEDVDVG-----------------DSEALYGKSSD 182

  Fly   459 VTAGGDVELAKDSSGHCCNTCGKSFPSALEMLAH-AEIHARFPPFKCVLCGISFYEEQAIKRHLH 522
                |:....|......|.||||.:.|..::..| :|.|::.|...|.:||:...:|:.::.|::
  Fly   183 ----GEDRPTKKRVKQECTTCGKVYNSWYQLQKHISEEHSKQPNHICPICGVIRRDEEYLELHMN 243

  Fly   523 TRHPSELNANSCVLCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRD-KS 586
            .                              |..:....|..|.|:|.......|||..|.| |.
  Fly   244 L------------------------------HEGKTEKQCRYCPKSFSRPVNTLRHMRMHWDKKK 278

  Fly   587 VVCEVCQEEFPDGRTLSNHRHSHSTTTPGKLFPCLECGKTFGSRSSQQIHVRIHTGERP-YGCRY 650
            ..||.|...|.....|.|||..|.......:  |..|..:|.||.:...|..||...|| :.|..
  Fly   279 YQCEKCGLRFSQDNLLYNHRLRHEAEENPII--CSICNVSFKSRKTFNHHTLIHKENRPRHYCSV 341

  Fly   651 CWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDVA-------RNTYH 708
            |.|:|.:..||:.|.:.|.|:..|.......|..|:||...|:....|...|.       .|:..
  Fly   342 CPKSFTERYTLKMHMKTHEGDVVYGVREEAPADEQQVVEELHVDVDESEAAVTVIMSDNDENSGF 406

  Fly   709 CTVCSEDLASSNDLIQHL 726
            |.:|:.:..:..:|..||
  Fly   407 CLICNTNFENKKELEHHL 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7987NP_650375.1 C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 170..186 CDD:275368
COG5048 326..734 CDD:227381 84/343 (24%)
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368
C2H2 Zn finger 424..444 CDD:275368 1/19 (5%)
C2H2 Zn finger 476..496 CDD:275368 8/20 (40%)
C2H2 Zn finger 504..523 CDD:275368 5/18 (28%)
C2H2 Zn finger 534..554 CDD:275370 0/19 (0%)
C2H2 Zn finger 562..582 CDD:275370 7/19 (37%)
C2H2 Zn finger 589..609 CDD:275368 8/19 (42%)
C2H2 Zn finger 620..640 CDD:275368 6/19 (32%)
C2H2 Zn finger 648..668 CDD:275368 7/19 (37%)
zf-H2C2_2 661..685 CDD:290200 6/23 (26%)
C2H2 Zn finger 676..696 CDD:275368 5/19 (26%)
C2H2 Zn finger 709..726 CDD:275371 3/16 (19%)
Hph 921..>1017 CDD:290417
Sry-deltaNP_524581.1 COG5048 <205..360 CDD:227381 47/186 (25%)
C2H2 Zn finger 225..245 CDD:275368 5/49 (10%)
C2H2 Zn finger 253..273 CDD:275368 7/19 (37%)
C2H2 Zn finger 281..301 CDD:275368 8/19 (42%)
C2H2 Zn finger 310..327 CDD:275370 5/16 (31%)
zf-C2H2 337..359 CDD:278523 7/21 (33%)
C2H2 Zn finger 339..359 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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