DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7987 and Sry-beta

DIOPT Version :9

Sequence 1:NP_650375.1 Gene:CG7987 / 41768 FlyBaseID:FBgn0038244 Length:1283 Species:Drosophila melanogaster
Sequence 2:NP_001303451.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster


Alignment Length:325 Identity:79/325 - (24%)
Similarity:124/325 - (38%) Gaps:93/325 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 CQQC-GLAFAREKALVSHTKNHRVD-----------------SPFECNQCQEMFWDNSSLQEHQK 389
            |:|. |.|..:::|    .|..||.                 .|.|.::|:| |.....|.|.  
  Fly    90 CRQVEGKAETKQQA----AKRARVQVPAFKIVQATALKEPERQPGEEDECEE-FMKEEMLDEE-- 147

  Fly   390 THQFEESNSEYDPASAEESGSESEADEQLYGEFYCNECGISFHRQDLLRRHAKMH-CKPSDQAAV 453
             .||.|.:... |:|.||..:|:.       |..|:.||..|..|::|.||.|.. |:.|:||. 
  Fly   148 -FQFSEPDDSM-PSSEEEFFTETT-------EIPCHICGEMFSSQEVLERHIKADTCQKSEQAT- 202

  Fly   454 GSNSDVTAGGDVELAKDSSGHCCNTCGKSFPSALEMLAHAEIHARFPPFKCVLCGISFYEEQAIK 518
                                  ||.||........:..|..:|......:|..|...|..::.:.
  Fly   203 ----------------------CNVCGLKVKDDEVLDLHMNLHEGKTELECRYCDKKFSHKRNVL 245

  Fly   519 RHLHTRHPSELNANSCVLCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASH- 582
            ||:...                           ||   :|.:.|.|||:.|.....:..|:..| 
  Fly   246 RHMEVH---------------------------WD---KKKYQCDKCGERFSLSWLMYNHLMRHD 280

  Fly   583 -RDKSVVCEVCQEEFPDGRTLSNHRHSHSTTTPGKLFPCLECGKTFGSRSSQQIHVRIHTG-ERP 645
             .:.:::||||.::|...||..:|..:|.|..|  .:||.:|.|:|..:.:.::|.|:|.. |:|
  Fly   281 AEENALICEVCHQQFKTKRTYKHHLRTHQTDRP--RYPCPDCEKSFVDKYTLKVHKRVHQPVEKP 343

  Fly   646  645
              Fly   344  343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7987NP_650375.1 C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 170..186 CDD:275368
COG5048 326..734 CDD:227381 79/325 (24%)
C2H2 Zn finger 343..363 CDD:275368 6/20 (30%)
C2H2 Zn finger 371..391 CDD:275368 5/19 (26%)
C2H2 Zn finger 424..444 CDD:275368 9/19 (47%)
C2H2 Zn finger 476..496 CDD:275368 5/19 (26%)
C2H2 Zn finger 504..523 CDD:275368 5/18 (28%)
C2H2 Zn finger 534..554 CDD:275370 1/19 (5%)
C2H2 Zn finger 562..582 CDD:275370 6/19 (32%)
C2H2 Zn finger 589..609 CDD:275368 8/19 (42%)
C2H2 Zn finger 620..640 CDD:275368 6/19 (32%)
C2H2 Zn finger 648..668 CDD:275368
zf-H2C2_2 661..685 CDD:290200
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 709..726 CDD:275371
Hph 921..>1017 CDD:290417
Sry-betaNP_001303451.1 C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..251 CDD:275368 5/19 (26%)
C2H2 Zn finger 259..308 CDD:275368 15/48 (31%)
C2H2 Zn finger 288..303 CDD:275370 7/14 (50%)
zf-C2H2 315..337 CDD:278523 7/21 (33%)
C2H2 Zn finger 317..337 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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