DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7987 and Neu2

DIOPT Version :10

Sequence 1:NP_650375.1 Gene:CG7987 / 41768 FlyBaseID:FBgn0038244 Length:1283 Species:Drosophila melanogaster
Sequence 2:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster


Alignment Length:412 Identity:97/412 - (23%)
Similarity:143/412 - (34%) Gaps:127/412 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 CNQC----QEMFWDNSSLQEHQKTHQF-------EESNSEYDPASAEESGSESEADEQLYGEFYC 424
            |..|    |..|   ..::.::::|||       .|..||.|.:...|....:|.|.|       
  Fly    38 CKSCLEDAQNAF---DIIETYERSHQFYRFLKDVREEESENDGSGCSEEVEAAERDLQ------- 92

  Fly   425 NECGISFHRQDLLRRHAKMHCKPSDQAAVGSNSDVTAGGDVEL------AKDSSGHCCNTCGKSF 483
                                    |.|     .||.:|.:.::      ||:..|..|:.|.|||
  Fly    93 ------------------------DGA-----DDVDSGNEPDINECDIKAKEKPGFSCSHCPKSF 128

  Fly   484 PSALEMLAHAEIHARFPPFKCVLCGISFYEEQAIKRHLHTRHPSELNANSCVLCGKECRDRKALI 548
            .....:..|...|....||.|.||..||.....::.|:.|                         
  Fly   129 QVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRT------------------------- 168

  Fly   549 KHAWDHSREKCHSCSKCGKNFHNKARLKRHMASH-RDKSVVCEVCQEEFPDGRTLSNHRHSHSTT 612
                 |:.|:...||.|.::|.....||.|:..| |..|:.|..||:.|.....|..|..:|:..
  Fly   169 -----HTGERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDE 228

  Fly   613 TPGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKH----ERIHTGEKP 673
            |.   |.|.:|.|:|.......:|:|:|. ||.:.|.:|.|.||....|::|    .|.....|.
  Fly   229 TQ---FKCSQCSKSFQVEHELWMHMRVHQ-ERLFTCGHCSKDFALHAYLKRHLSRNARCSQSSKA 289

  Fly   674 YA-----------CSVCPRAFNQRVVLREHIRSH-------------------HSGLDVARNTYH 708
            .|           |..||:.|..|..|..|::||                   ||  :..|..:.
  Fly   290 SAHKTLGHSKALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEGPCKSSGSKPAHS--NAQRKPFK 352

  Fly   709 CTVCSEDLASSNDLIQHLIQHS 730
            |:.|....:..:.|:.||..|:
  Fly   353 CSSCPRTFSRKSALLTHLQTHT 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7987NP_650375.1 C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 170..186 CDD:275368
COG5048 326..734 CDD:227381 97/412 (24%)
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368 4/23 (17%)
C2H2 Zn finger 424..444 CDD:275368 0/19 (0%)
zf-C2H2_8 427..522 CDD:464935 23/100 (23%)
C2H2 Zn finger 476..496 CDD:275368 6/19 (32%)
C2H2 Zn finger 504..523 CDD:275368 6/18 (33%)
C2H2 Zn finger 534..554 CDD:275370 0/19 (0%)
C2H2 Zn finger 562..582 CDD:275370 7/19 (37%)
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
C2H2 Zn finger 620..640 CDD:275368 6/19 (32%)
C2H2 Zn finger 648..668 CDD:275368 8/23 (35%)
zf-H2C2_2 661..685 CDD:463886 9/38 (24%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 709..726 CDD:275371 3/16 (19%)
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 7/27 (26%)
COG5048 <119..241 CDD:227381 40/154 (26%)
C2H2 Zn finger 121..141 CDD:275368 6/19 (32%)
zf-H2C2_2 133..156 CDD:463886 7/22 (32%)
C2H2 Zn finger 149..169 CDD:275368 7/49 (14%)
zf-H2C2_2 162..185 CDD:463886 7/52 (13%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
zf-C2H2_8 206..286 CDD:464935 25/83 (30%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
C2H2 Zn finger 260..297 CDD:275368 10/36 (28%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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