DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cys and Cst8

DIOPT Version :9

Sequence 1:NP_476856.1 Gene:Cys / 41767 FlyBaseID:FBgn0004629 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_062131.1 Gene:Cst8 / 29679 RGDID:2434 Length:142 Species:Rattus norvegicus


Alignment Length:113 Identity:30/113 - (26%)
Similarity:45/113 - (39%) Gaps:15/113 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NVVKSLCILGLVLVSLIATQAADEQVVG-GVSQLEGNSRKEALELLDATL-AQLATGDGPSYKAI 64
            |.||:....|.:.:|    .|..:|.|. .:.:....|..:.|.|||.|| |.|...|...|. |
  Rat    27 NEVKAQRYFGSISIS----NANVKQCVWFAMKEYNKGSEDKYLFLLDKTLHATLQITDRMEYH-I 86

  Fly    65 NVTSVTGQVVAGSLNTYEVELDNGSDKKQ----CTVKIWTQPWLKENG 108
            :| .::.......||..|..:...:.|.:    |:..:...||   ||
  Rat    87 DV-QISRSNCRKPLNNTENCIPQKNPKLEKKLSCSFLVGALPW---NG 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CysNP_476856.1 CY 26..115 CDD:214484 24/89 (27%)
Cst8NP_062131.1 CY 38..140 CDD:214484 26/102 (25%)
Secondary area of contact. /evidence=ECO:0000255 77..81 0/3 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565344at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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