DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cys and RGD1563136

DIOPT Version :9

Sequence 1:NP_476856.1 Gene:Cys / 41767 FlyBaseID:FBgn0004629 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_215875.4 Gene:RGD1563136 / 296230 RGDID:1563136 Length:176 Species:Rattus norvegicus


Alignment Length:28 Identity:7/28 - (25%)
Similarity:17/28 - (60%) Gaps:4/28 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 NGSD---KKQC-TVKIWTQPWLKENGTN 110
            |.||   |:.| .::::.:.::::|..|
  Rat    20 NFSDVTAKRICERIEMFARNFMEKNKLN 47

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CysNP_476856.1 CY 26..115 CDD:214484 7/28 (25%)
RGD1563136XP_215875.4 CY <99..174 CDD:298856
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565344at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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