DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cys and Cst3

DIOPT Version :9

Sequence 1:NP_476856.1 Gene:Cys / 41767 FlyBaseID:FBgn0004629 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_036969.1 Gene:Cst3 / 25307 RGDID:2432 Length:140 Species:Rattus norvegicus


Alignment Length:138 Identity:34/138 - (24%)
Similarity:62/138 - (44%) Gaps:31/138 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VKSLCILGLVL-VSLIATQAADEQVVGGVSQLEGNSRKEALE-LLDATLAQLATGDGPSY--KAI 64
            ::||.:|..|| |:...|.....:::|  :..|.::.:|.:: .||..:::...|...:|  :||
  Rat     5 LRSLMLLLAVLAVAWAGTSRPPPRLLG--APQEADASEEGVQRALDFAVSEYNKGSNDAYHSRAI 67

  Fly    65 NVTSVTGQVVAGSLNTY-EVELDNGSDKKQ--------------------CTVKIWTQPWLKENG 108
            .|.....|:||| :|.| :||:...:..|.                    |:.:|::.||   .|
  Rat    68 QVVRARKQLVAG-INYYLDVEMGRTTCTKSQTNLTNCPFHDQPHLMRKALCSFQIYSVPW---KG 128

  Fly   109 TNIKIKCS 116
            |:...|.|
  Rat   129 THTLTKSS 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CysNP_476856.1 CY 26..115 CDD:214484 25/112 (22%)
Cst3NP_036969.1 CY 28..138 CDD:214484 27/115 (23%)
Secondary area of contact 75..79 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CZYG
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565344at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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