DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cys and XB990108

DIOPT Version :9

Sequence 1:NP_476856.1 Gene:Cys / 41767 FlyBaseID:FBgn0004629 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_017949729.1 Gene:XB990108 / 100485583 XenbaseID:XB-GENE-990109 Length:134 Species:Xenopus tropicalis


Alignment Length:119 Identity:31/119 - (26%)
Similarity:52/119 - (43%) Gaps:31/119 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SLCILGLVLVSLI--ATQAADEQVVGGVSQLEGNSRKEALELLDATLAQLATGDGPSYKAINVTS 68
            |..:|.:|.|.::  |.||:|....|     ..|:...|||..:     |.:.|..|||.|::.:
 Frog    12 SFALLAVVTVEMMVGAPQASDPNTEG-----VNNATNFALEQYN-----LMSNDARSYKLIDLIA 66

  Fly    69 VTGQVVAG-------------------SLNTYEVELDNGSDKKQCTVKIWTQPW 103
            |..|||||                   :|...|:..::.:..:.||.::::.||
 Frog    67 VKTQVVAGVNYYLTMKIGATNCRKNSENLEACELAQNDEAQTRICTFQVYSIPW 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CysNP_476856.1 CY 26..115 CDD:214484 23/97 (24%)
XB990108XP_017949729.1 CY 23..132 CDD:214484 27/108 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565344at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.