DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14852 and spt-5

DIOPT Version :10

Sequence 1:NP_650373.1 Gene:CG14852 / 41765 FlyBaseID:FBgn0038242 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_502283.1 Gene:spt-5 / 178143 WormBaseID:WBGene00005015 Length:1208 Species:Caenorhabditis elegans


Alignment Length:125 Identity:50/125 - (40%)
Similarity:59/125 - (47%) Gaps:21/125 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SSYSFAEDDPTDGSTTPTDGSTTPTDGSTTPTDGSTTPT-DGSNTPT--DGSTTPTDGSTTPTDG 79
            |.||.::....|...||..||.||..|:.||..||.||. ||..||.  :|..||..||.||..|
 Worm   793 SFYSSSKTPMRDSGKTPMYGSKTPMYGAQTPMYGSMTPAYDGGRTPAYGEGGRTPAYGSKTPAYG 857

  Fly    80 -------STTP---TDGSTTPTDGSTSPSTSP---STGDNTSPSTGSPDS--TP---DSG 121
                   |.||   .|.|.||..||...:.:|   ||....:|:.||.|:  ||   |||
 Worm   858 DLDEHSSSRTPAYGNDSSRTPAYGSADGARTPAYGSTEGGRTPAYGSMDNSRTPAYDDSG 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14852NP_650373.1 Herpes_BLLF1 <27..>93 CDD:282904 33/78 (42%)
spt-5NP_502283.1 NGN_Euk 184..269 CDD:193577
KOW_Spt5_1 280..317 CDD:240505
KOW_Spt5_2 421..471 CDD:240506
KOW_Spt5_3 472..522 CDD:240507
KOW_Spt5_4 599..648 CDD:240508
KOW_Spt5_5 726..778 CDD:240509
CTD 812..927 CDD:215026 44/106 (42%)
CTD 926..1059 CDD:215026
KOW_Spt5_6 1147..1205 CDD:240510
Blue background indicates that the domain is not in the aligned region.

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