DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde6 and PDE2

DIOPT Version :10

Sequence 1:NP_001262566.1 Gene:Pde6 / 41760 FlyBaseID:FBgn0038237 Length:1124 Species:Drosophila melanogaster
Sequence 2:NP_015005.1 Gene:PDE2 / 854542 SGDID:S000005887 Length:526 Species:Saccharomyces cerevisiae


Alignment Length:430 Identity:88/430 - (20%)
Similarity:166/430 - (38%) Gaps:101/430 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   585 INK-------ANGVPFTDSDASIFEAFAIFCGLGIHNTQMYENACKLMAKQKVA-----LECLSY 637
            |||       .|.||....:|:|:.       |.:|   :.::..:.:.|..|.     :|.:|:
Yeast   135 INKNSYGTVNGNSVPTQACEANIYT-------LLLH---LNDSKAQHLRKASVPRLIRNIEFMSF 189

  Fly   638 HATASQDQTEKLTQDVIAEAESYNLYS-FTFTDFELVDDDTCRAVLRMFMQCNLVSQFQIPYDVL 701
                ..|..||::|:   .:..:|:.| :.|....|...:.......:..:.:..::..|..:.|
Yeast   190 ----LSDPIEKISQE---GSHYWNILSTWDFCALSLSTQELIWCGFTLIKKLSKDAKVLIADNKL 247

  Fly   702 CRWVLSVRKNYRPV-KYHNWRHALNVAQTMFA----MLKTGKMERFMTDLEILGLLVACLCHDLD 761
            ...:.::..:|..| |:||:|||::|.|..:.    :||...::..:       |.:|.:.||:.
Yeast   248 LLLLFTLESSYHQVNKFHNFRHAIDVMQATWRLCTYLLKDNPVQTLL-------LCMAAIGHDVG 305

  Fly   762 HRGTNNAFQTKTESPLAILY-TTSTMEHHHFDQCVMILNSEGNNIFQALSPEDYRSVMKT----- 820
            |.||||......||.:|..: ..|.:|:.|            ..:||.|..|.:..::..     
Yeast   306 HPGTNNQLLCNCESEVAQNFKNVSILENFH------------RELFQQLLSEHWPQLLSISKKKF 358

  Fly   821 --VESAILSTDLAMYFKKRNAFLELVENGEFDWQGEEKKDLLCGMMMTACDVSAIAKPWEVQHKV 883
              :..|||:||:|::.:..:..:.         :...|:..|..:::.|.|:|.:.:...:..:.
Yeast   359 DFISEAILATDMALHSQYEDRLMH---------ENPMKQITLISLIIKAADISNVTRTLSISARW 414

  Fly   884 AKLVADEFFD----------------------------QGDLEKLQLNTQPVAMMDRERKD--EL 918
            |.|:..||.|                            :.|||.:|.....|...|...||  .:
Yeast   415 AYLITLEFNDCALLETFHKAHRPEQDCFGDSYKNVDSPKEDLESIQNILVNVTDPDDIIKDHPHI 479

  Fly   919 PKMQVGFIDVICLPLYRVLCDTFPWITPLYEGTLENRRNW 958
            |..|:.||:......:..|...|..:..|.:....|:..|
Yeast   480 PNGQIFFINTFAEVFFNALSQKFSGLKFLSDNVKINKEYW 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde6NP_001262566.1 GAF 247..406 CDD:214500
GAF 431..619 CDD:214500 10/40 (25%)
PDEase_I 717..950 CDD:459723 59/274 (22%)
PDE2NP_015005.1 PDEase_I 264..512 CDD:459723 59/275 (21%)
Blue background indicates that the domain is not in the aligned region.

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