DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde6 and PDE8A

DIOPT Version :10

Sequence 1:NP_001262566.1 Gene:Pde6 / 41760 FlyBaseID:FBgn0038237 Length:1124 Species:Drosophila melanogaster
Sequence 2:NP_002596.1 Gene:PDE8A / 5151 HGNCID:8793 Length:829 Species:Homo sapiens


Alignment Length:815 Identity:172/815 - (21%)
Similarity:306/815 - (37%) Gaps:213/815 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 LIRDVAN--ELDIDVLCHKILVNVGLLTHADRGSLFLAKGTPTNKYLVAKLFDVTQKTALKDAVT 300
            :|.|..|  :||.:.||..|           |.|                  .:::.|.:...|.
Human   128 IIIDHRNPRQLDAEALCRSI-----------RSS------------------KLSENTVIVGVVR 163

  Fly   301 RASAEEI-IIPFGIGIAGMVAQTKQMINIKEAYKDARFNCEIDLKTGYKTNAILCMPICNYEGDI 364
            |...||: ::|| |. ||...:..:..||...|.:.     :.|:.| :..:.|.:..||     
Human   164 RVDREELSVMPF-IS-AGFTRRYVENPNIMACYNEL-----LQLEFG-EVRSQLKLRACN----- 215

  Fly   365 IGVAQIINKTNGCMEFDEHDVEIFRRYLTFCG------IGIQNAQLF-----EMSVQEYRRNQI- 417
             .|...:..:...:|....|     |::.:..      :|.|:.:|.     |:.:.|.:.:.: 
Human   216 -SVFTALENSEDAIEITSED-----RFIQYANPAFETTMGYQSGELIGKELGEVPINEKKADLLD 274

  Fly   418 LLNLARSIFEE---------------QNNLECLVTKIMTEARELLKCERCSVFLVDLDCCEASHL 467
            .:|....|.:|               |.|::  :..::.:..::    |..|.::.: |...:..
Human   275 TINSCIRIGKEWQGIYYAKKKNGDNIQQNVK--IIPVIGQGGKI----RHYVSIIRV-CNGNNKA 332

  Fly   468 EKIIE-------KPNQPATRAIKSADSFEEKKMRNRFTVLFELGGEYQAANVSRPSVSELSSSTL 525
            |||.|       ..||......:...|.:.|.:.:|.|   |:..:.:.::::|     :.|.|:
Human   333 EKISECVQSDTHTDNQTGKHKDRRKGSLDVKAVASRAT---EVSSQRRHSSMAR-----IHSMTI 389

  Fly   526 AQIAQFVATTGQTVNICDVIEWVRDHNQIRAEDEIDSTQAILCMPIMNAQKKVIGV---AQLINK 587
            .      |...:.:||                  |::.|....||:..|..:|:.:   .:|.:.
Human   390 E------APITKVINI------------------INAAQESSPMPVTEALDRVLEILRTTELYSP 430

  Fly   588 ANGVPFTDSDASIFEAFAIFCGLGIHNTQMYENACKLMAKQKVALECLSYHATASQDQTEKLTQD 652
            ..|....|..|:     .:..||      |.:...:|...:.|          .|...|:.::.:
Human   431 QFGAKDDDPHAN-----DLVGGL------MSDGLRRLSGNEYV----------LSTKNTQMVSSN 474

  Fly   653 VIA---------------EAESYNLYSFTFTDFELVDDDTCRAV----LRMFMQCNLVSQFQIPY 698
            :|.               |.|.|    :.|..|||......|.:    |:||.:..:........
Human   475 IITPISLDDVPPRIARAMENEEY----WDFDIFELEAATHNRPLIYLGLKMFARFGICEFLHCSE 535

  Fly   699 DVLCRWVLSVRKNYRPVK-YHNWRHALNVAQTMFAMLKTGKMERFMTDLEILGLLVACLCHDLDH 762
            ..|..|:..:..||.... |||..|:.:|.......|...:::..:..::.:..|:|...||:||
Human   536 STLRSWLQIIEANYHSSNPYHNSTHSADVLHATAYFLSKERIKETLDPIDEVAALIAATIHDVDH 600

  Fly   763 RGTNNAFQTKTESPLAILYT-TSTMEHHHF----------DQCVMILNSEGNNIFQALSPEDYRS 816
            .|..|:|.....|.|||||. |:.:|.||.          |:|         |||:.:...|||:
Human   601 PGRTNSFLCNAGSELAILYNDTAVLESHHAALAFQLTTGDDKC---------NIFKNMERNDYRT 656

  Fly   817 VMKTVESAILSTDLAMYFKKRNAFLE--------LVENGEFDWQGE---------EKKDLLCGMM 864
            :.:.:...:|:|::..:|:..|.|:.        |.||||.|...|         |.:.|:..|:
Human   657 LRQGIIDMVLATEMTKHFEHVNKFVNSINKPLATLEENGETDKNQEVINTMLRTPENRTLIKRML 721

  Fly   865 MTACDVSAIAKPWEVQHKVAKLVADEFFDQGDLEKLQLNTQPVAMMDRERKD-ELPKMQVGFIDV 928
            :...|||...:|.:...:.|..:::|:|.|.|.||.|  ..||.|...:|.. .:||.|:.|||.
Human   722 IKCADVSNPCRPLQYCIEWAARISEEYFSQTDEEKQQ--GLPVVMPVFDRNTCSIPKSQISFIDY 784

  Fly   929 ICLPLYRVLCDTFPWITPLYEGTLENRRNWQDLAE 963
            ....::.. .|.|..:..|.:....|.:.|:.|.|
Human   785 FITDMFDA-WDAFVDLPDLMQHLDNNFKYWKGLDE 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde6NP_001262566.1 GAF 247..406 CDD:214500 31/170 (18%)
GAF 431..619 CDD:214500 34/197 (17%)
PDEase_I 717..950 CDD:459723 73/261 (28%)
PDE8ANP_002596.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..46
RpfG 73..>169 CDD:442663 13/69 (19%)
PAS 219..>324 CDD:441804 15/115 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 341..360 2/18 (11%)
Involved in RAF1-binding. /evidence=ECO:0000269|PubMed:23509299 454..461 1/6 (17%)
PDEase_I 555..806 CDD:459723 73/262 (28%)
Blue background indicates that the domain is not in the aligned region.

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