DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde6 and PDE6A

DIOPT Version :10

Sequence 1:NP_001262566.1 Gene:Pde6 / 41760 FlyBaseID:FBgn0038237 Length:1124 Species:Drosophila melanogaster
Sequence 2:NP_000431.2 Gene:PDE6A / 5145 HGNCID:8785 Length:860 Species:Homo sapiens


Alignment Length:834 Identity:263/834 - (31%)
Similarity:429/834 - (51%) Gaps:93/834 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 HKRPSVTSDLFQQWMAASPTVQQKSPRSLSNSSASSLPECRRHLMDLDEGELFMELIRDVANELD 247
            |.|..:.|||.....||.......||.|                  ::|.|:..:|:||....|.
Human    27 HYRAKLISDLLGAKEAAVDFSNYHSPSS------------------MEESEIIFDLLRDFQENLQ 73

  Fly   248 IDVLCHKILVNVGLLTHADRGSLFLAKGTPTNKYLVAKLFDVTQKTALKDAVTRASAEEIIIPFG 312
            .:.....::..:..|..|||.|||:.:.......|..:||:|.:...|:|.:.... :||:.|..
Human    74 TEKCIFNVMKKLCFLLQADRMSLFMYRTRNGIAELATRLFNVHKDAVLEDCLVMPD-QEIVFPLD 137

  Fly   313 IGIAGMVAQTKQMINIKEAYKDARFNCEIDLKTGYKTNAILCMPICNYEGDIIGVAQIINKTNGC 377
            :||.|.||.:|::.|:....:|..|...:|:.|.|||..||..||.|.: |::.:...:||.:| 
Human   138 MGIVGHVAHSKKIANVPNTEEDEHFCDFVDILTEYKTKNILASPIMNGK-DVVAIIMAVNKVDG- 200

  Fly   378 MEFDEHDVEIFRRYLTFCGIGIQNAQLFEMSVQEYRRNQILLNLARSIFEEQNNLECLVTKIMTE 442
            ..|.:.|.||..:||.|..:.::...|..:...|.||.||||.....:|||..::|....|.:..
Human   201 SHFTKRDEEILLKYLNFANLIMKVYHLSYLHNCETRRGQILLWSGSKVFEELTDIERQFHKALYT 265

  Fly   443 ARELLKCERCSVFLVDLDCCEASHLEKIIE-------------KPNQPATRAIKSADSFEEKKMR 494
            .|..|.|:|.||.|:|:     :..::..:             .|..|..|.|            
Human   266 VRAFLNCDRYSVGLLDM-----TKQKEFFDVWPVLMGEVPPYSGPRTPDGREI------------ 313

  Fly   495 NRFTVL-FELGGEYQAANVSRPSVSELSSSTLAQIAQFVATTGQTVNICDVIEWVRDHNQIRAED 558
            |.:.|: :.|.|:.....:..|.....  :.::.:..:||..|.   ||:::....:......::
Human   314 NFYKVIDYILHGKEDIKVIPNPPPDHW--ALVSGLPAYVAQNGL---ICNIMNAPAEDFFAFQKE 373

  Fly   559 EIDST----QAILCMPIMNAQKKVIGVAQLINKANGVPFTDSDASIFEAFAIFCGLGIHNTQMYE 619
            .:|.:    :.:|.|||:|.:::::|||...|:.:|.||.:.|.::.|:...|.|..:.|...||
Human   374 PLDESGWMIKNVLSMPIVNKKEEIVGVATFYNRKDGKPFDEMDETLMESLTQFLGWSVLNPDTYE 438

  Fly   620 NACKLMAKQKVALECLSYHATASQDQTEKL--TQDV--------------------IAEAESYNL 662
            :..||..::.:..:.:.||.....::.:|:  |::|                    :.:|:.|.:
Human   439 SMNKLENRKDIFQDIVKYHVKCDNEEIQKILKTREVYGKEPWECEEEELAEILQAELPDADKYEI 503

  Fly   663 YSFTFTDFELVDDDTCRAVLRMFMQCNLVSQFQIPYDVLCRWVLSVRKNYRPVKYHNWRHALNVA 727
            ..|.|:|..|.:.:..:..::|:.:..:|.:|.||.:.|.|::.|:.|.||.:.||||||..||.
Human   504 NKFHFSDLPLTELELVKCGIQMYYELKVVDKFHIPQEALVRFMYSLSKGYRKITYHNWRHGFNVG 568

  Fly   728 QTMFAMLKTGKMERFMTDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYTTSTMEHHHFD 792
            ||||::|.|||::|:.||||.|.::.|..|||:|||||||.:|.|:::|||.|:.:|.:|.||.:
Human   569 QTMFSLLVTGKLKRYFTDLEALAMVTAAFCHDIDHRGTNNLYQMKSQNPLAKLHGSSILERHHLE 633

  Fly   793 QCVMILNSEGNNIFQALSPEDYRSVMKTVESAILSTDLAMYFKKRNAFLELVE-----NGEFDWQ 852
            ....:|..|..||||.|:...:...:..::.||::||||:|||||..|.::|:     ..|.:|.
Human   634 FGKTLLRDESLNIFQNLNRRQHEHAIHMMDIAIIATDLALYFKKRTMFQKIVDQSKTYESEQEWT 698

  Fly   853 -----GEEKKDLLCGMMMTACDVSAIAKPWEVQHKVAKLVADEFFDQGDLEKLQLNTQPVAMMDR 912
                 .:.:|:::..|||||||:|||.||||||.:||.|||.||::|||||:..|...|:.||||
Human   699 QYMMLEQTRKEIVMAMMMTACDLSAITKPWEVQSQVALLVAAEFWEQGDLERTVLQQNPIPMMDR 763

  Fly   913 ERKDELPKMQVGFIDVICLPLYRVLCDTFPWITPLYEGTLENRRNWQDLAEKVE 966
            .:.|||||:||||||.:|..:|:........|||:.:|...||:.|:.||::.:
Human   764 NKADELPKLQVGFIDFVCTFVYKEFSRFHEEITPMLDGITNNRKEWKALADEYD 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde6NP_001262566.1 GAF 247..406 CDD:214500 47/158 (30%)
GAF 431..619 CDD:214500 42/205 (20%)
PDEase_I 717..950 CDD:459723 116/242 (48%)
PDE6ANP_000431.2 GAF 75..232 CDD:214500 47/159 (30%)
GAF 254..441 CDD:214500 44/208 (21%)
PDEase_I 558..802 CDD:459723 116/243 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 821..860
Blue background indicates that the domain is not in the aligned region.

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