DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde6 and PDE4A

DIOPT Version :10

Sequence 1:NP_001262566.1 Gene:Pde6 / 41760 FlyBaseID:FBgn0038237 Length:1124 Species:Drosophila melanogaster
Sequence 2:NP_001104777.1 Gene:PDE4A / 5141 HGNCID:8780 Length:886 Species:Homo sapiens


Alignment Length:874 Identity:190/874 - (21%)
Similarity:324/874 - (37%) Gaps:261/874 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 GLLTHA-----DRGSLFLAKGTPTNKYLVAKLFDVTQKTALKDA--VTRASAEEIII-PFGIGIA 316
            ||:.||     .|...||        |.....:|::.||..:::  .:.|.||::|: ||...:|
Human   130 GLVLHAGAATSQRRESFL--------YRSDSDYDMSPKTMSRNSSVTSEAHAEDLIVTPFAQVLA 186

  Fly   317 GMVAQTKQMINIKEAYKDARFNCEIDLKTGYKTNAILCMPICNYEGDIIGVAQIINKTNGCMEFD 381
            .:              :..|.|..:      .||    :|:.:.:...:|     ..|..|    
Human   187 SL--------------RSVRSNFSL------LTN----VPVPSNKRSPLG-----GPTPVC---- 218

  Fly   382 EHDVEIFRRYLTFCGIGIQNAQLFEMSVQEYRRNQILLNLARSIFEEQNNLECLVTKIMTEAREL 446
                               .|.|.|.:.|:         |||...||                  
Human   219 -------------------KATLSEETCQQ---------LARETLEE------------------ 237

  Fly   447 LKCERCSVFLVDLDCCEASHLEKIIEKPNQPATRAIKSADSFEEKKMRNRFTVLFELGGEYQAAN 511
                        ||.|    ||::   ......|::....|.:.|:|.||     ||        
Human   238 ------------LDWC----LEQL---ETMQTYRSVSEMASHKFKRMLNR-----EL-------- 270

  Fly   512 VSRPSVSELSSSTLAQIAQFVATTGQTVNICDVIEWVRDHNQIRAED----EIDSTQAIL----- 567
               ..:||:|.|. .|::::::||           ::...|::....    |.:..||..     
Human   271 ---THLSEMSRSG-NQVSEYISTT-----------FLDKQNEVEIPSPTMKEREKQQAPRPRPSQ 320

  Fly   568 ----CMPIMNAQKKVIGVAQLINKANGVPFTDSDASIFEAFAIFCGLGIHNTQMYENACKLMAKQ 628
                .:|.:....::.|:.:|::..:                      ::|:.:.....|     
Human   321 PPPPPVPHLQPMSQITGLKKLMHSNS----------------------LNNSNIPRFGVK----- 358

  Fly   629 KVALECLSYHATASQDQTEKLTQDVIAEAESYNLYSFTFTDFELVDDDTCRAVLRMFMQCNLVSQ 693
                          .||.|.|.|: :.....:.|..|..:|:......|| .:..:|.:.:|:.:
Human   359 --------------TDQEELLAQE-LENLNKWGLNIFCVSDYAGGRSLTC-IMYMIFQERDLLKK 407

  Fly   694 FQIPYDVLCRWVLSVRKNYR-PVKYHNWRHALNVAQTMFAMLKTGKMERFMTDLEILGLLVACLC 757
            |:||.|.:..::|::..:|. .|.|||..||.:|.|:...:|.|..::...||||||..|.|...
Human   408 FRIPVDTMVTYMLTLEDHYHADVAYHNSLHAADVLQSTHVLLATPALDAVFTDLEILAALFAAAI 472

  Fly   758 HDLDHRGTNNAFQTKTESPLAILYT-TSTMEHHHFDQCVMILNSEGNNIFQALSPEDYRSVMKTV 821
            ||:||.|.:|.|...|.|.||::|. .|.:|:||......:|..:..:|||.||....:|:.|.|
Human   473 HDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEDNCDIFQNLSKRQRQSLRKMV 537

  Fly   822 ESAILSTDLAMYFKKRNAFLELVENGEFDWQG-------EEKKDLLCGMMMTACDVSAIAKPWEV 879
            ...:|:||::.:.........:||..:....|       .::..:|..|:..| |:|...||.|:
Human   538 IDMVLATDMSKHMTLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLRNMVHCA-DLSNPTKPLEL 601

  Fly   880 QHKVAKLVADEFFDQGDLEKLQ-LNTQPVAMMDRERKDELPKMQVGFIDVICLPLYRVLCD-TFP 942
            ..:....:..|||.|||.|:.: :...|  |.|:... .:.|.||||||.|..||:....| ..|
Human   602 YRQWTDRIMAEFFQQGDRERERGMEISP--MCDKHTA-SVEKSQVGFIDYIVHPLWETWADLVHP 663

  Fly   943 WITPLYEGTLENRRNWQDLAEKVEMGLTWIDHDTIDKPVEE--------------FAACADEEIK 993
            ....:.: |||:.|:|...|         |.......|.||              |....:|| :
Human   664 DAQEILD-TLEDNRDWYYSA---------IRQSPSPPPEEESRGPGHPPLPDKFQFELTLEEE-E 717

  Fly   994 DIEFTVTTLNCNQQSQHGSEDSHTPEHQRSGSRLSMKKTGALGKAVRSKLSKTLYNSMDGSKPKT 1058
            :.|.::..:.|..|.                   ::...|..|  |...|..|:  :.:.|..:.
Human   718 EEEISMAQIPCTAQE-------------------ALTAQGLSG--VEEALDATI--AWEASPAQE 759

  Fly  1059 SLKLLESHVSEDMDDKSPTSPSQPQASGS 1087
            ||:::....|.:.:.::.....|.|::||
Human   760 SLEVMAQEASLEAELEAVYLTQQAQSTGS 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde6NP_001262566.1 GAF 247..406 CDD:214500 28/153 (18%)
GAF 431..619 CDD:214500 28/200 (14%)
PDEase_I 717..950 CDD:459723 78/242 (32%)
PDE4ANP_001104777.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..128
PDE4_UCR 178..293 CDD:465648 40/240 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..331 5/36 (14%)
PDEase_I 432..672 CDD:459723 78/244 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 682..705 5/31 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 866..886
Blue background indicates that the domain is not in the aligned region.

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