DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde6 and Pde9a

DIOPT Version :10

Sequence 1:NP_001262566.1 Gene:Pde6 / 41760 FlyBaseID:FBgn0038237 Length:1124 Species:Drosophila melanogaster
Sequence 2:XP_036016291.1 Gene:Pde9a / 18585 MGIID:1277179 Length:536 Species:Mus musculus


Alignment Length:413 Identity:121/413 - (29%)
Similarity:199/413 - (48%) Gaps:70/413 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   627 KQKVALECLS-YHATASQDQTEKLTQDVIAEAESYNL---YSF-------------TFTDFELVD 674
            :::|.||.|. ......:...:|:.:::.|.....|.   |||             |:..: |:.
Mouse   125 EKRVELEGLKVVEIEKCKSDIKKMREELAARNSRTNCPCKYSFLDNKKLTPRRDVPTYPKY-LLS 188

  Fly   675 DDTCRAVLR-------------------MFMQCNLVSQFQIPYDVLCRWVLSVRKNYRPVKYHNW 720
            .:|..|:.:                   |:....||..|.|....|.||:|.|..|||...:||:
Mouse   189 PETIEALRKPTFDVWLWEPNEMLSCLEHMYHDLGLVRDFSINPITLRRWLLCVHDNYRNNPFHNF 253

  Fly   721 RHALNVAQTMFAML-KTGKMERFMTDLEILGLLVACLCHDLDHRGTNNAFQTKTESPLAILYT-T 783
            ||...|.|.|::|: ..|..|:| :.::||.|:.|.:||||||.|.||.:|....:.||:.|. .
Mouse   254 RHCFCVTQMMYSMVWLCGLQEKF-SQMDILVLMTAAICHDLDHPGYNNTYQINARTELAVRYNDI 317

  Fly   784 STMEHHHFDQCVMILNSEGNNIFQALSPEDYRSVMKTVESAILSTDLAMYFKKRNAFLELVENGE 848
            |.:|:||......||.....|||.::.||.:|.:.:.:.:.||:||:|.:.:..::|.|.:||  
Mouse   318 SPLENHHCAIAFQILARPECNIFASVPPEGFRQIRQGMITLILATDMARHAEIMDSFKEKMEN-- 380

  Fly   849 FDWQGEEKKDLLCGMMMTACDVSAIAKPWEVQHKVAKLVADEFFDQGDLEKLQLNTQPVA-MMDR 912
            ||:..||...||..:::..||:|...:|.||.......:.:|:|.|.|.||.:  ..||| .|||
Mouse   381 FDYSNEEHLTLLKMILIKCCDISNEVRPMEVAEPWVDCLLEEYFMQSDREKSE--GLPVAPFMDR 443

  Fly   913 ERKDELPK--MQVGFIDVICLPLYRVLCDTFP-----WITPLYEGTLENRRNWQDLAEKVEMGLT 970
               |::.|  .|:|||..:.:|::..:...||     .:.||:    |:|.::::|.:       
Mouse   444 ---DKVTKATAQIGFIKFVLIPMFETVTKLFPVVEETMLRPLW----ESREHYEELKQ------- 494

  Fly   971 WIDHDTID--KPVEEFAACADEE 991
             :| |.:.  |.|:...|.|:|:
Mouse   495 -LD-DAMKEVKAVQRVQAVAEED 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde6NP_001262566.1 GAF 247..406 CDD:214500
GAF 431..619 CDD:214500
PDEase_I 717..950 CDD:459723 84/242 (35%)
Pde9aXP_036016291.1 PDEase_I 250..478 CDD:459723 82/235 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.