Sequence 1: | NP_001262566.1 | Gene: | Pde6 / 41760 | FlyBaseID: | FBgn0038237 | Length: | 1124 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004911040.1 | Gene: | pde4c / 100380081 | XenbaseID: | XB-GENE-1002336 | Length: | 801 | Species: | Xenopus tropicalis |
Alignment Length: | 693 | Identity: | 154/693 - (22%) |
---|---|---|---|
Similarity: | 275/693 - (39%) | Gaps: | 132/693 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 466 HLEKIIEKPNQPATRAIKSADSFEEKKMRNRFTVLFEL----------GGEYQAA---NVSRPSV 517
Fly 518 SELSSSTLAQIAQFVATTGQTVNICDVIEWVRDH-NQIRAEDEIDSTQAILCMPIMNAQKKVIGV 581
Fly 582 AQLINKANGV------PFTDSDASIFEAFAIFCGLGIHNTQMYENACKLMAKQKVALECLS---- 636
Fly 637 -YHATASQDQT-----EKLTQDVIAEAESYNLYSFTFTDFELVDDDTCR----AVLRMFMQCNLV 691
Fly 692 SQFQIPYDVLCRWVLSVRKNYR-PVKYHNWRHALNVAQTMFAMLKTGKMERFMTDLEILGLLVAC 755
Fly 756 LCHDLDHRGTNNAFQTKTESPLAILYT-TSTMEHHHFDQCVMILNSEGNNIFQALSPEDYRSVMK 819
Fly 820 TVESAILSTDLAMYFKKRNAFLELVENGEFDWQG-------EEKKDLLCGMMMTACDVSAIAKPW 877
Fly 878 EVQHKVAKLVADEFFDQGDLEKLQ-LNTQPVAMMDRERKDELPKMQVGFIDVICLPLYRVLCD-T 940
Fly 941 FPWITPLYEGTLENRRNW---------------QD------LAEKVEMGLTWIDHDTIDKPVEEF 984
Fly 985 AACADEEIKDIEFTVTTLNCNQQSQHGSEDSHTPEHQRSGSRLSMKKTGALG------KAVRSKL 1043
Fly 1044 SKTLYNSMDGSKPKTSLKLLESHVSEDMDDKSPTSPSQPQASG 1086 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pde6 | NP_001262566.1 | GAF | 247..406 | CDD:214500 | |
GAF | 431..619 | CDD:214500 | 24/172 (14%) | ||
PDEase_I | 717..950 | CDD:278654 | 77/242 (32%) | ||
pde4c | XP_004911040.1 | PDEase_I | 394..635 | CDD:278654 | 78/245 (32%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D904682at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |