DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313a1 and cyp4v2.2

DIOPT Version :9

Sequence 1:NP_650368.1 Gene:Cyp313a1 / 41759 FlyBaseID:FBgn0038236 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001072667.1 Gene:cyp4v2.2 / 780124 XenbaseID:XB-GENE-977085 Length:523 Species:Xenopus tropicalis


Alignment Length:526 Identity:157/526 - (29%)
Similarity:252/526 - (47%) Gaps:71/526 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLAVGALFWIYFLWSRRRLYFLMLKIPGP-IGLPILGSS--LEN--------IITYKRKLSFRTK 60
            |||:..|..:.....:||   ::..|||| ...|::|.:  |:|        |..|..  |:|.:
 Frog    22 LLALSILPALQDYVRKRR---ILKPIPGPGPNYPLIGDALFLKNNGGDFFLQICEYTE--SYRLQ 81

  Fly    61 YLNKYGSTILTWMGPVPFIVTRDPKVVEDIFSSPDCHNKSQHIVNA-----ITSCMGNGLLGKQD 120
            .|.|      .|:|.:||||......||.:.||      |:|:..|     :...:|.|||....
 Frog    82 PLLK------VWIGTIPFIVVYHADTVEPVLSS------SKHMDKAFLYKFLHPWLGKGLLTSTG 134

  Fly   121 PHWLDRRKHFNPSFKQDLLLSFFHIFDAETKVLMNLLDTYVDKGEIDVVPEMLRWSFKIAAQTTM 185
            ..|..|||...|:|...:|..|..:.:.::|:|:..|.|:||....|...::...:..|.::|.|
 Frog   135 EKWRSRRKMITPTFHFAILSEFLEVMNEQSKILVEKLQTHVDGESFDCFMDVTLCALDIISETAM 199

  Fly   186 GSEVKHDEHFKNGSLVESFESLISHSTLNILMPLVQNRMISKICGYDKLRA---------DNFSR 241
            |.:::...: ::...|::...         :..::|.|........|.|.|         .|...
 Frog   200 GRKIQAQSN-RDSEYVQAIYK---------MSDIIQRRQKMPWLWLDFLYAHLRDGKEHDKNLKI 254

  Fly   242 IQKMLDNVVNKKVNPLPK--------TDSDPESNIVINRA----MELYRKGD----ITYMDVKSE 290
            :....|..:.::...|.|        .||||||:....|:    |.|....|    ::|||::.|
 Frog   255 LHSFTDKAILERAEELKKMGEQKKEHCDSDPESDKPKKRSAFLDMLLMATDDAGNKMSYMDIREE 319

  Fly   291 CCIMIAAGYDTSALTVYHALFLLANHPEHQEAVFEELNGVFPDAGHFGITYPDMQKLDYLERVIK 355
            ....:..|:||:|..:..:||||.:|||.|..|.:||:.||..:.. .:|..|::||.|||.|||
 Frog   320 VDTFMFEGHDTTAAALNWSLFLLGSHPEAQRQVHKELDEVFGKSDR-PVTMDDLKKLRYLEAVIK 383

  Fly   356 ETLRLIPAIPITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADNFNPDNFLAENM 420
            |:||:.|::|:..|....|..: .|..:||||.:.|..:..||:||.: |:.:.|.|:.|..||.
 Frog   384 ESLRIYPSVPLFGRTVTEDCSI-RGFHVPKGVNVVIIPYALHRDPEYF-PEPEEFRPERFFPENA 446

  Fly   421 EQKHPYAYIPFARGKRNCIGSKYAMMSSKFALCRILRNYKISTSTLYKDLVYVDNMTMKLAEYPR 485
            ..::|||||||:.|.|||||.::|:|..|..|..|||||.:..|...::|..:..:.::..:...
 Frog   447 SGRNPYAYIPFSAGLRNCIGQRFALMEEKVVLSSILRNYWVEASQKREELCLLGELILRPQDGMW 511

  Fly   486 LKLQRR 491
            :||:.|
 Frog   512 IKLKNR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a1NP_650368.1 p450 33..463 CDD:299894 145/470 (31%)
cyp4v2.2NP_001072667.1 p450 45..509 CDD:365848 147/490 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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