DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313a1 and cyp4b1.2

DIOPT Version :9

Sequence 1:NP_650368.1 Gene:Cyp313a1 / 41759 FlyBaseID:FBgn0038236 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001017348.1 Gene:cyp4b1.2 / 550102 XenbaseID:XB-GENE-963387 Length:515 Species:Xenopus tropicalis


Alignment Length:483 Identity:125/483 - (25%)
Similarity:223/483 - (46%) Gaps:45/483 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 INLLLAVGALFWIYFLWSR-RRLYFLMLKIPGPIGLPILGSSLENIITYKR---KLSFRTKYLNK 64
            :.||..|..|...|.|:|| ||....::..|||....:.|    ::..::|   .|.....::||
 Frog    25 VALLCVVLLLLKAYALYSRGRRFAAALVPFPGPPAHWLYG----HVNQFRRDGKDLDRLMVWVNK 85

  Fly    65 YGSTILTWMGPV--PFIVTRDPKVVEDIFSSPDCHNKSQHIVNAITSCMGNGLLGKQDPHWLDRR 127
            |.:....|:|..  ..|:| ||...:.:|...|  .|:....|.:...:|.|||......|...|
 Frog    86 YPNAFPLWIGKFFGTLIIT-DPDYAKVVFGRSD--PKTSTGYNFLVPWIGKGLLILSGNTWFQHR 147

  Fly   128 KHFNPSFKQDLLLSFFHIFDAETKVLMNLLDTYVDKGE------------IDVVPEMLRWSFKIA 180
            :...|.|..|:|..:..:....||::::.||.|.:|.|            :|.:.: ..:|:...
 Frog   148 RLITPGFHYDVLKPYVSLISDSTKIMLDELDVYSNKDESVELFQHVSLMTLDSIMK-CAFSYHSN 211

  Fly   181 AQTTMGS---EVKHDEHFKNGSLVESFESLISHSTL-NILMPLVQNRMISKICGYDKLRADN-FS 240
            .||...:   :..:|..:.....:.:|.   .||.| ..|.|  ......|.|....|..|. ..
 Frog   212 CQTDKDNDYIQAVYDLSWLTQQRIRTFP---YHSNLIYFLSP--HGFRFRKACRIVHLHTDKVIG 271

  Fly   241 RIQKMLDNVVNKKVNPLPKTDSDPESNIVINRAMELYRKGD-ITYMDVKSECCIMIAAGYDTSAL 304
            :.:|:|::  .:::..:.|.......:|::....|   .|. :::.|:::|....:..|:||::.
 Frog   272 QRKKLLES--KEELEKVQKKRHLDFLDILLCSKDE---NGQGLSHEDLRAEVDTFMFEGHDTTSS 331

  Fly   305 TVYHALFLLANHPEHQEAVFEELNGVFPDAGHFGITYPDMQKLDYLERVIKETLRLIPAIPITAR 369
            .:...|:.:|.|||||:...||::....:  ...:.:.|:.::.|....|||:|||.|.:|..:|
 Frog   332 GISWILYCMATHPEHQQKCREEISEALGE--RQTMEWDDLNRMPYTTMCIKESLRLYPPVPSVSR 394

  Fly   370 ETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADNFNPDNFLAENMEQKHPYAYIPFARG 434
            |....:...:|..:|.|:::.:.::..||||.|| .|.:.|:|..|..||..::|.:|::|||.|
 Frog   395 ELAKPITFHDGRSLPAGMLVSLQIYAIHRNPNVW-KDPEIFDPLRFSPENSSKRHSHAFVPFAAG 458

  Fly   435 KRNCIGSKYAMMSSKFALCRILRNYKIS 462
            .|||||..:||...|.|:...|:.:::|
 Frog   459 PRNCIGQNFAMNEMKVAVALTLKRFELS 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a1NP_650368.1 p450 33..463 CDD:299894 115/453 (25%)
cyp4b1.2NP_001017348.1 p450 55..508 CDD:278495 115/453 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.