DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313a1 and Cyp12a4

DIOPT Version :9

Sequence 1:NP_650368.1 Gene:Cyp313a1 / 41759 FlyBaseID:FBgn0038236 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster


Alignment Length:455 Identity:100/455 - (21%)
Similarity:190/455 - (41%) Gaps:69/455 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 MGPVPFIVTRDPKVVEDIFSS----PD-------CHNKSQHIVNAITSCMGNGLLGKQDPHWLDR 126
            ||..||:.|.:|:..|.:|.:    |:       .:::.::..:.....|  |::..|...|.|.
  Fly    95 MGNPPFLSTHNPQDFEVVFRNEGVWPNRPGNYTLLYHREEYRKDFYQGVM--GVIPTQGKPWGDF 157

  Fly   127 RKHFNPSFKQDLLLSFFH-----IFDAETKVLMNLLDTYVDKGEIDVVPEMLRWSFKIAAQTTMG 186
            |...||...|...:..::     :.....:.::.|.|....:...|.:..:.||:.:..:...:.
  Fly   158 RTVVNPVLMQPKNVRLYYKKMSQVNQEFVQRILELRDPDTLEAPDDFIDTINRWTLESVSVVALD 222

  Fly   187 SE---VKHDEHFKNGSLVESFESLISHSTLNILMPLVQNRMISKICGYDKLRADNFSRIQKMLDN 248
            .:   :|:..  |....::.|..|.....::|.:.:       |...:..::.....|:.:.||.
  Fly   223 KQLGLLKNSN--KESEALKLFHYLDEFFIVSIDLEM-------KPSPWRYIKTPKLKRLMRALDG 278

  Fly   249 V-------VNKKVNPLPKTDSD----PES-NIVINRAMELYRK-GDITYMDVKSECCIMIAAGYD 300
            :       |::.:..|.|...:    ||: ..|:.:.:::.|| ..:..||       |:.||.|
  Fly   279 IQEVTLAYVDEAIERLDKEAKEGVVRPENEQSVLEKLLKVDRKVATVMAMD-------MLMAGVD 336

  Fly   301 TSALTVYHALFLLANHPEHQEAVFEELNGVFPDAGHFGITYPDMQKLDYLERVIKETLRLIPAIP 365
            |::.|....|..||.:||.|..:.||:..|.|:. :...|...|:.:.||...|||:.||.|.|.
  Fly   337 TTSSTFTALLLCLAKNPEKQARLREEVMKVLPNK-NSEFTEASMKNVPYLRACIKESQRLHPLIV 400

  Fly   366 ITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADNFNPDNFL-----------AEN 419
            ..||....|..|| |..:|.|..:.|...:.....|.: |.|..|.|:.:|           |..
  Fly   401 GNARVLARDAVLS-GYRVPAGTYVNIVPLNALTRDEYF-PQASEFLPERWLRSPKDSESKCPANE 463

  Fly   420 MEQKHPYAYIPFARGKRNCIGSKYAMMSSKFALCRILRNYKIS----TSTLYKD-LVYVDNMTMK 479
            ::..:|:.::||..|.|.|:|.:...|..:....|::||:.:.    |...::. |:.:.|:.:|
  Fly   464 LKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPTENAFRSALINLPNIPLK 528

  Fly   480  479
              Fly   529  528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a1NP_650368.1 p450 33..463 CDD:299894 96/436 (22%)
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 100/455 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442733
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24305
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.