DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp313a1 and Cyp4f39

DIOPT Version :10

Sequence 1:NP_650368.1 Gene:Cyp313a1 / 41759 FlyBaseID:FBgn0038236 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_234837.3 Gene:Cyp4f39 / 299566 RGDID:1308796 Length:550 Species:Rattus norvegicus


Alignment Length:535 Identity:127/535 - (23%)
Similarity:216/535 - (40%) Gaps:99/535 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LTINLLLAVGALFWIYFLWSRRRLYFLMLKIPGPIGLPILGSSLENIITYKRKLSFRTKYLNKYG 66
            |...|||....||..:.:..||...|     |.|.|...|...:...:..::.|....|.|:...
  Rat    34 LLFRLLLQAFKLFSDFRITCRRLSCF-----PEPPGRHWLLGHMSMYLPNEKGLQNEKKVLDTMH 93

  Fly    67 STILTWMGP-VPFIVTRDPKVVEDIF-SSPDCHNKSQHIVNAITSCMGNGLLGKQDPHWLDRRKH 129
            ..||.|:|| :|.:|...|..::.:. :|.....|.:...:.:...:|:|||..:...|...|:.
  Rat    94 HIILAWVGPFLPLLVLVHPDYIKPVLGASAAIAPKDEFFYSFLKPWLGDGLLISKGNKWSRHRRL 158

  Fly   130 FNPSFKQDLLLSFFHIFDAETKVLMNLLDTYVDKGEIDVVPEMLRWSFKIAAQTTMGSEVKHDEH 194
            ..|:|..|:|..:..||:....::                                  ..|...|
  Rat   159 LTPAFHFDILKPYMKIFNQSVNIM----------------------------------HAKWRRH 189

  Fly   195 FKNGSLVESFESL--ISHSTLNILMPLV-------QNRM---ISKICGYDKLRADNFSRIQKMLD 247
            ...|| |.||:..  :|..||:.|...|       |.::   ||.|.....|......|:...||
  Rat   190 LAEGS-VTSFDMFEHVSLMTLDSLQKCVFSYSSDCQEKLSDYISSIIELSALVVRRQYRLHHYLD 253

  Fly   248 NVV-----NKKVNPLPKTDSDPESNIVINRAMELYRKG--------------------------- 280
            .:.     .::......|..:..:.::..|...|...|                           
  Rat   254 FIYYLTADGRRFRQACDTVHNFTTEVIQQRRRALRELGAEAWLKAKQGKTLDFIDVLLLAKDEEG 318

  Fly   281 -DITYMDVKSECCIMIAAGYDTSALTVYHALFLLANHPEHQEAVFEELNGVFPDAGHFGITYPDM 344
             :::..|:::|....:..|:||::..:..|||.||.:||:|:...||:..|........:.:.|:
  Rat   319 KELSDEDIRAEADTFMFEGHDTTSSGLSWALFNLAKYPEYQDKCREEIQEVMKGRELEELDWDDL 383

  Fly   345 QKLDYLERVIKETLRLIPAIPITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADN 409
            .:|.:....|||:||..|.:.:.:|....|::|.:|.:||||::..:.::.||.||.|| ||:..
  Rat   384 TQLPFTTMCIKESLRQFPPVTLISRRCTEDIKLPDGRIIPKGIICLVSIYGTHYNPLVW-PDSKV 447

  Fly   410 FNPDNFLAENMEQKHPYAYIPFARGKRNCIGSKYAMMSSKFALCRILRNYKISTSTLYKDLVYVD 474
            :||..|..:..:|:.|.|::||:.|.|||||..:||...:..:...|..:::|          ||
  Rat   448 YNPYRFDPDIPQQRSPLAFVPFSAGPRNCIGQSFAMAEMRVVVALTLLRFRLS----------VD 502

  Fly   475 NMTMKLAEYPRLKLQ 489
            . |.|:...|.|.|:
  Rat   503 R-TRKVRRKPELILR 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a1NP_650368.1 CYP313-like 66..487 CDD:410680 109/467 (23%)
Cyp4f39XP_234837.3 CYP4F 82..523 CDD:410772 114/482 (24%)

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