Protein Alignment CG8461 and Rrp36

DIOPT Version :10

• Sequence 1: NP_650367.1
• Gene: CG8461 / 41758
• FlyBaseID: FBgn0038235
• Length: 244
• Species: Drosophila melanogaster
• Sequence 2: NP_001386340.1
• Gene: Rrp36 / 100360664
• RGDID: 2321693
• Length: 245
• Species: Rattus norvegicus
• Alignment Length: 225
• Identity: 77/225 - (34%)
• Similarity: 130/225 - (57%)
• Gaps: 24/225 - (10%)

  Fly    26 REDLKGMSFEEIMKLKEELGAKVYKEAVLG--SKSSRPQKPKAKTDLKRLNKNRPREMTTRRQVP 88
            :.|...|||||:::|:.::..|..|:.|.|  :|:..|::|...:|     |:||.||:.:..||
  Rat    30 KADTSDMSFEELLRLQSQVKPKTSKQLVAGNNTKTQSPRQPACVSD-----KHRPLEMSAKVPVP 89

  Fly    89 FLGAEHRVERKKNVELRDPRFDEKSGTYSAETFKKNYQFVSQIRAKEVGQLKKKLDEVEDEAEKH 153
            ||.....:.:|   ..||||||:.||.|:.|.|.|.|||::.|||||...:|::|.: ....|||
  Rat    90 FLRQVVPISKK---VARDPRFDDLSGEYNPEVFDKTYQFLNDIRAKEKQLVKRQLKK-HRSGEKH 150

  Fly   154 HIKDTMQRLINKNVEDKKWHTKQKQ-------LKKERSAIQKKHDLGQQPHYLTKKERRAKELVA 211
               :.:|:|:.:..:.:....::||       ||:||.|:.::   |.:|::|.|.|:|...|..
  Rat   151 ---EKLQQLLQRMEQQEMAQQERKQQQELRLALKQERRALAQQ---GHRPYFLKKSEQRQLALAE 209

  Fly   212 QFEKLKNTGKLNKHMEKRRKKNAAKDRKRI 241
            :|:.||.:.||...:.::|::||.|||:.:
  Rat   210 KFKDLKRSKKLESFLSRKRRRNAGKDRRHL 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG8461	NP_650367.1	RRP36	72..232	CDD:461829	57/166 (34%)
Rrp36	NP_001386340.1	RRP36	74..230	CDD:461829	58/170 (34%)