DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL11 and LOC102555453

DIOPT Version :9

Sequence 1:NP_524351.1 Gene:mRpL11 / 41757 FlyBaseID:FBgn0038234 Length:196 Species:Drosophila melanogaster
Sequence 2:XP_006256697.1 Gene:LOC102555453 / 102555453 RGDID:7600399 Length:165 Species:Rattus norvegicus


Alignment Length:16 Identity:7/16 - (43%)
Similarity:11/16 - (68%) Gaps:0/16 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKAAGKLKSLKKTVE 16
            ::||.|..|.|:.||:
  Rat    46 IAKATGDWKGLRITVK 61

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL11NP_524351.1 RL11 24..158 CDD:197819
Ribosomal_L11 24..157 CDD:100101
LOC102555453XP_006256697.1 PLN03072 1..165 CDD:178621 7/16 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0080
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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