DRSC/TRiP Functional Genomics Resources

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Protein Alignment HtrA2 and Tysnd1

DIOPT Version :10

Sequence 1:NP_650366.1 Gene:HtrA2 / 41756 FlyBaseID:FBgn0038233 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001102402.1 Gene:Tysnd1 / 365571 RGDID:1307354 Length:567 Species:Rattus norvegicus


Alignment Length:188 Identity:45/188 - (23%)
Similarity:80/188 - (42%) Gaps:34/188 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 GSGFIIEQNGLILTNAHVVINKPHTMVQVRLSD---------GRTFPATIEDVDQTSDLATLRIQ 196
            |||..:... |::|..||.   |....:|.:..         ||...||.|.......:.:|..:
  Rat   358 GSGVAVAPR-LVVTCRHVA---PRETARVLVHSATPRNVAIWGRVVFATQETSPYDIAVVSLEEE 418

  Fly   197 VNNLSVMRLGKSSTLRSGEWVVALGSPL---ALSNTVTAGVISSTQRASQELGLRNRDINYLQTD 258
            :|.:.|.  ..:.....||.|..:|..:   |...:||:|::|:.........:       |||.
  Rat   419 LNGVPVP--VPAEHFHEGEPVSVVGFGVFGQACGPSVTSGILSAVVHVDDAPVM-------LQTT 474

  Fly   259 AAITFGNSGGPLVNL-DGEAIGV---NSMKVTAG-----ISFAIPIDYVKVFLERAAE 307
            .|:..|:|||||.:. .|:.:|:   |:.....|     ::|:|||..::..|::.::
  Rat   475 CAVHGGSSGGPLFSTRSGDLLGIVASNTRDNNTGATYPHLNFSIPITVLQPALKQYSQ 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HtrA2NP_650366.1 DegQ 141..421 CDD:440035 45/188 (24%)
Tysnd1NP_001102402.1 Trypsin_2 358..497 CDD:433149 37/151 (25%)

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