DRSC/TRiP Functional Genomics Resources

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Protein Alignment HtrA2 and psmd-9

DIOPT Version :9

Sequence 1:NP_001262565.1 Gene:HtrA2 / 41756 FlyBaseID:FBgn0038233 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001379558.1 Gene:psmd-9 / 24104302 WormBaseID:WBGene00016623 Length:197 Species:Caenorhabditis elegans


Alignment Length:106 Identity:21/106 - (19%)
Similarity:43/106 - (40%) Gaps:17/106 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 LTPDILFELKSR----------SQNMPSNLTHG---VLVWKVIVGSPAHSGGLQPGDIVTHINKK 383
            ||..|:.|:::.          |:..|.:.|..   |.:..|:..|||..||.:..|::......
 Worm    72 LTEKIVVEMENENKEVSGQTATSEEKPVHRTSNEPFVKISSVVELSPADIGGFRKDDLIIQYGNL 136

  Fly   384 EIKNSSDVYDAL----ADNSKTLDIVILRGVKQMHVTITPE 420
            ...|.:|:.:..    ....|.:.:.::|..:.:.:.|.|:
 Worm   137 HHGNFNDMQEVAQITKQSEDKIIRVTVIRENRPVRLEICPK 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HtrA2NP_001262565.1 DegQ 67..422 CDD:223343 21/106 (20%)
Trypsin_2 141..280 CDD:290102
PDZ_serine_protease 323..417 CDD:238487 19/101 (19%)
psmd-9NP_001379558.1 Nas2_N 7..81 CDD:408080 4/8 (50%)
PDZ_6 110..165 CDD:407688 10/54 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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