DRSC/TRiP Functional Genomics Resources

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Protein Alignment HtrA2 and LOC108179121

DIOPT Version :9

Sequence 1:NP_001262565.1 Gene:HtrA2 / 41756 FlyBaseID:FBgn0038233 Length:422 Species:Drosophila melanogaster
Sequence 2:XP_017208437.1 Gene:LOC108179121 / 108179121 -ID:- Length:80 Species:Danio rerio


Alignment Length:78 Identity:30/78 - (38%)
Similarity:55/78 - (70%) Gaps:2/78 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 RSQNMPSNLTHGVLVWKVIVGSPAHSGGLQPGDIVTHINKKEIKNSSDVYDALADNSKTLDIVIL 407
            |..:.| :::||||:.:|||||||:..|::|||::..||..::..|.::|:|:. .|::|::|:.
Zfish     2 RDPSFP-DVSHGVLIHRVIVGSPANRAGMKPGDVIIEINGVKVNTSEEIYNAVR-TSESLNVVVR 64

  Fly   408 RGVKQMHVTITPE 420
            ||...:.:.:|||
Zfish    65 RGAGLLMLHMTPE 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HtrA2NP_001262565.1 DegQ 67..422 CDD:223343 30/78 (38%)
Trypsin_2 141..280 CDD:290102
PDZ_serine_protease 323..417 CDD:238487 27/73 (37%)
LOC108179121XP_017208437.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D238833at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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