DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HtrA2 and htra4

DIOPT Version :9

Sequence 1:NP_001262565.1 Gene:HtrA2 / 41756 FlyBaseID:FBgn0038233 Length:422 Species:Drosophila melanogaster
Sequence 2:XP_017211746.2 Gene:htra4 / 100334257 ZFINID:ZDB-GENE-131120-192 Length:459 Species:Danio rerio


Alignment Length:426 Identity:167/426 - (39%)
Similarity:245/426 - (57%) Gaps:48/426 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GSHRLEVIFKRCIASPVLHSHAANRRSSQLAIKEGDPNSNGNSGQY-------QQNGEQKEKGWR 62
            |..||.|    |.|.......:|.|  |.......:|....:...|       .:|...|..|  
Zfish    67 GEDRLGV----CGAGMTCEERSAER--STCVCDSHEPVCGSDGRTYPSICRLKAENRRAKTSG-- 123

  Fly    63 RLVRFFVPFSLGAVVSAAIIQREDLTPTIAASK-MTGRRRDFNFIADVVAGCADSVVYIEIKDTR 126
                  :|    ||:   .|||   .|....|: .:..|..||||||||...|.:||::|:    
Zfish   124 ------IP----AVI---FIQR---GPCETGSRNPSSMRYKFNFIADVVDKIAPAVVHLEL---- 168

  Fly   127 HFDY--FSGQPITASNGSGFIIEQNGLILTNAHVVINKPHTMVQVRLSDGRTFPATIEDVDQTSD 189
             |..  ||.|.:..|:|||||:.::|.|:|||||:.||..  ::|.|.:|..:.|||:||||..|
Zfish   169 -FSRLPFSNQDVPVSSGSGFIVSEDGWIVTNAHVLSNKQR--IKVELKNGMLYDATIKDVDQKLD 230

  Fly   190 LATLRIQVNN-LSVMRLGKSSTLRSGEWVVALGSPLALSNTVTAGVISSTQRASQELGLRNRDIN 253
            :|.::|.... |.|:.||:||.||.||:|||:|||.:|.||||.|:||:|.|...||||:|.|:.
Zfish   231 IALIKIDSETALPVLLLGRSSDLRPGEFVVAVGSPFSLQNTVTTGIISTTHRGGHELGLQNSDME 295

  Fly   254 YLQTDAAITFGNSGGPLVNLDGEAIGVNSMKVTAGISFAIPIDYVKVFLERAAEKRKKGSAYKTG 318
            |:||||.|.:||||||||||||:.||:|::|||.|||||||.|.::.||..:.|:::||..... 
Zfish   296 YIQTDAIINYGNSGGPLVNLDGDVIGINTLKVTPGISFAIPSDRIRQFLADSYERQRKGRTLTK- 359

  Fly   319 YPVKRYMGITMLTLTPDILFELKSRSQNMPSNLTHGVLVWKVIVGSPAHSGGLQPGDIVTHINKK 383
               |:|||:.||.|:..::.||:.:..:.| :::.||.|::||.|:.|.|.|:...|::..||.:
Zfish   360 ---KKYMGVRMLQLSAALIRELREKESSFP-DVSSGVYVYEVIPGTAAFSAGMLNQDVIISINGQ 420

  Fly   384 EIKNSSDVYDALADNSKTLDIVILRGVKQMHVTITP 419
            .:.::.||..|:..| :.|.:::.|..|::.:|:.|
Zfish   421 PVYSTEDVSQAVQSN-EILSLMVRRAQKEITLTVVP 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HtrA2NP_001262565.1 DegQ 67..422 CDD:223343 153/357 (43%)
Trypsin_2 141..280 CDD:290102 78/139 (56%)
PDZ_serine_protease 323..417 CDD:238487 28/93 (30%)
htra4XP_017211746.2 IGFBP 27..80 CDD:306685 6/16 (38%)
KAZAL_FS 92..135 CDD:238052 11/60 (18%)
DegQ 118..459 CDD:223343 155/369 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 176 1.000 Domainoid score I3556
eggNOG 1 0.900 - - E1_COG0265
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 326 1.000 Inparanoid score I2456
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D238833at33208
OrthoFinder 1 1.000 - - FOG0000153
OrthoInspector 1 1.000 - - otm25664
orthoMCL 1 0.900 - - OOG6_100391
Panther 1 1.100 - - O PTHR22939
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X265
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.830

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