DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-c and STARD8

DIOPT Version :9

Sequence 1:NP_001097786.1 Gene:cv-c / 41749 FlyBaseID:FBgn0285955 Length:2351 Species:Drosophila melanogaster
Sequence 2:XP_005262371.1 Gene:STARD8 / 9754 HGNCID:19161 Length:1107 Species:Homo sapiens


Alignment Length:1149 Identity:361/1149 - (31%)
Similarity:547/1149 - (47%) Gaps:241/1149 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1377 AEIEAVEACKWLRAAGFPQYAQMYEDHQFPIDLNNVAKDHTNLENDQLQSLYRRLCVLNRCATMR 1441
            ||.||..||:||:|.|||||.|::|:..||:|:.:|.|:|..|:.|.|.:|.|||..||.||:|:
Human    26 AEAEAKRACEWLQATGFPQYVQLFEEGSFPLDIGSVKKNHGFLDEDSLGALCRRLMTLNNCASMK 90

  Fly  1442 LD---QSHKPQTPQQKEESDDENFALSEHWTFQPHIRRWSRIGEMGLELPP-PGLLSLNVEKTES 1502
            |:   || |....|.::..::|...:|.||.||...:.||.:|...|..|| |||.:  ....||
Human    91 LEVHFQS-KQCLSQNEDSEEEEQCTISSHWAFQQESKCWSPMGSSDLLAPPSPGLPA--TSSCES 152

  Fly  1503 SSKESSPDRFEEDGAGITLVTPGCSKAGGIPNDGSSLGEGSDSGRLR-RSGSERIKDQAK----- 1561
            ...|.|......    ||:..|  .:...:|..|.: ...||...|. ..|.|..:|:||     
Human   153 VLTELSATSLPV----ITVSLP--PEPADLPLPGRA-PSSSDRPLLSPTQGQEGPQDKAKKRHRN 210

  Fly  1562 -ALLRRVESIKSRRRKRQNRENVVISGPT---VLDLSQF-----------------------GQR 1599
             :.|:.:||::.:.:....:.....|..|   |...|.|                       |..
Human   211 RSFLKHLESLRRKEKSGSQQAEPKHSPATSEKVSKASSFRSCRGFLSAGFYRAKNWAATSAGGSG 275

  Fly  1600 SSLRK-----PDAVYSTPP----------SPSALSPMHTFPKAPFFGNDLKVPSHSDNFLSP--- 1646
            ::.||     |.|.:..|.          .|....| .|||::      |.:.|     |.|   
Human   276 ANTRKAWEAWPVASFRHPQWTHRGDCLVHVPGDHKP-GTFPRS------LSIES-----LCPEDG 328

  Fly  1647 ----------------NRSSPKRTPTTPRSMRTSPLHFFSSPMSQLKEGKSDD------------ 1683
                            .|.|...|.:...:....|..:.:.|:....|.:.:|            
Human   329 HRLADWQPGRRWGCEGRRGSCGSTGSHASTYDNLPELYPAEPVMVGAEAEDEDDEESGGSYAHLD 393

  Fly  1684 ----------------SSSYYSD-------SQESSTGGKLS------------------------ 1701
                            |.:.|.|       .:|:::..:::                        
Human   394 DILQHVWGLQQRVELWSRAMYPDLGPGDEEEEEATSSVEIATVEVKCQAEALSQMEVPAHGESPA 458

  Fly  1702 -------------LRKPSKARRFLQRTGKV------------DDIGAHSDSECHQGRKLLIKDAN 1741
                         .:.|::|....|...:.            .:..|||..|......|.:::.:
Human   459 WAQAEVQPAVLAPAQAPAEAEPVAQEEAEAPAPAPAPAPAQDSEQEAHSGGEPTFASSLSVEEGH 523

  Fly  1742 S-NTTEVKVKKL-TRGGSLNLGKDPKKRDGFRSSSFRSRSTSRKEAKNDEDTAGATTNGGSKRQP 1804
            | :.|.....:| :.|.|:|..:......|.::|..|.|..|           |.   |.|..:|
Human   524 SISDTVASSSELDSSGNSMNEAEAAGPLAGLQASMPRERRDS-----------GV---GASLTRP 574

  Fly  1805 V--VRWHSFQMEERPNMIFRKCFSKKIEPLQEDAGGMPFAAMSAGQLQIIRKLALVTLTGHMERY 1867
            .  :||||||...||::               ::..:......|||:.::.|.:|:.||..||:|
Human   575 CRKLRWHSFQNSHRPSL---------------NSESLEINRQFAGQINLLHKGSLLRLTAFMEKY 624

  Fly  1868 CPSHRSGWNWELPKFIKKIKMPDYKDKKVFGVPLLMILQRSGQTLPLAVRAAFRWLQLNALDQVG 1932
            ...|:.||.|.:|||:::.|.|||:.:.|||||.|:.:||:||.||.:::.|.|:|:...|||||
Human   625 TVPHKQGWVWSMPKFMRRNKTPDYRGQHVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQCLDQVG 689

  Fly  1933 IFRKSGGKSRIMKLREQIEVTDSTAECMDVFDLQQAYDVADMLKQYFRELPESLLTTKMSETFVA 1997
            ||||||.||||..||:..|.:.... |   ::.|.||||||:||||||:|||.:.|:|::.||:.
Human   690 IFRKSGVKSRIQNLRQMNETSPDNV-C---YEGQSAYDVADLLKQYFRDLPEPIFTSKLTTTFLQ 750

  Fly  1998 IFQHLPAEVRLDAVQCAVLLLPDENREILYVLLEFLTIVAANSQQNQMTSNNLGVCLAQSIFHSS 2062
            |:|.||.:..|.|.|.|.|||||||||:|..||.||:.: |::::||||:.||.||||.||||.:
Human   751 IYQLLPKDQWLAAAQAATLLLPDENREVLQTLLYFLSDI-ASAEENQMTAGNLAVCLAPSIFHLN 814

  Fly  2063 ISTGSASVSASPRRKGKGS--GMPDMKELAEAKASHECLSFMIEHYKQIYTAAKEK-LSKC-NFS 2123
            :|...   |.|||.|.|.|  |.|..::|::..|:.:.||.||...|:::...::. |..| ::|
Human   815 VSKKD---SPSPRIKSKRSLIGRPGPRDLSDNMAATQGLSHMISDCKKLFQVPQDMVLQLCSSYS 876

  Fly  2124 YMEESKPLP-------LEALGEGMQFHNWRGYLYECTSATIKEGREKTRGWFSINSLNDSSVDIA 2181
            ..|.|.|.|       .:|.|..:..     |:.|.....:::..|:.:||.|:.  .....::|
Human   877 AAELSPPGPALAELRQAQAAGVSLSL-----YMEENIQDLLRDAAERFKGWMSVP--GPQHTELA 934

  Fly  2182 YKKVGDGHPLRLWRCSTEIEGPPKEVLEFVIKQRASWDTNLLQCQTVKKLDDRTEIYQYALDGQL 2246
            .:|..||||||||:.|||:..||..||..|:::||.||.:||:.|.::.|....|:|.|..|...
Human   935 CRKAPDGHPLRLWKASTEVAAPPAVVLHRVLRERALWDEDLLRAQVLEALMPGVELYHYVTDSMA 999

  Fly  2247 ---TTDFCVLRSWQTDLPRGACVIVETSIDHAKAKPLFGAVRGVVLASRYLIEPCGSGRSRVMHL 2308
               ..||.|||.|::|||||.|::|..|:|..:..|..| ||.::|.|:||:||||.||||:.|:
Human  1000 PHPCRDFVVLRMWRSDLPRGGCLLVSQSLDPEQPVPESG-VRALMLTSQYLMEPCGLGRSRLTHI 1063

  Fly  2309 ARVDVKGKTPEWYNKNYGHICSHYLSRIRLAFKHV-ADGPESKV 2351
            .|.|::|::|:||||.:||:|:..:::||.:|..: |.|||:|:
Human  1064 CRADLRGRSPDWYNKVFGHLCAMEVAKIRDSFPTLQAAGPETKL 1107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-cNP_001097786.1 SAM_DLC1,2-like 1382..1441 CDD:188937 29/58 (50%)
RhoGAP_DLC1 1893..2116 CDD:239840 108/224 (48%)
SRPBCC 2148..2343 CDD:301327 82/197 (42%)
STARD8XP_005262371.1 SAM_superfamily 31..90 CDD:301707 29/58 (50%)
RhoGAP 653..867 CDD:295372 108/221 (49%)
START_STARD8-like 894..1098 CDD:176916 84/211 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 197 1.000 Domainoid score I3097
eggNOG 1 0.900 - - E1_KOG2200
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001209
OrthoInspector 1 1.000 - - otm40592
orthoMCL 1 0.900 - - OOG6_103453
Panther 1 1.100 - - O PTHR12659
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X752
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
109.810

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