DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-c and AT3G54800

DIOPT Version :10

Sequence 1:NP_001097786.1 Gene:cv-c / 41749 FlyBaseID:FBgn0285955 Length:2351 Species:Drosophila melanogaster
Sequence 2:NP_191040.2 Gene:AT3G54800 / 824645 AraportID:AT3G54800 Length:733 Species:Arabidopsis thaliana


Alignment Length:371 Identity:75/371 - (20%)
Similarity:132/371 - (35%) Gaps:95/371 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1976 KQYFRELPESLLTTKMSETFVAIFQHLPAE-----VRLDAVQCAVLLLPDENREILYVLLEFLTI 2035
            |:|| .|.|:.||:         |:.:|::     .|..::.|.: .:.|..||..:  .:.|.|
plant    29 KRYF-VLHENNLTS---------FKSVPSDHNEEPERRASLDCCI-RVTDNGRESFH--RKILFI 80

  Fly  2036 VAANSQQNQMTSNNLGVCLAQSIFHSSISTGSASVSASPRRKGKGSGMPDMKELAEAKASHECLS 2100
            ....:..|.:....||.        ||....:..:.:......||..:||.:             
plant    81 FTLYNTSNHLDQLKLGA--------SSPEEAAKWIRSLQDASQKGFPIPDCE------------- 124

  Fly  2101 FMIEHYKQIYTAAKEKLSKCNFSYMEESKPLPLEALGEGMQFHNWRGYLYECTSATIKEGREKTR 2165
            |.:.|       |::.|.|.:.|.....|        ..:.:.|:....|..||..::       
plant   125 FFVSH-------AEKGLVKLDVSKRNRRK--------NSVDWTNYSSTNYSSTSLNVE------- 167

  Fly  2166 GWFSINSLNDSSVDIAYKKVGDGHPLRLWRCSTE-------------------IEGPPKEVLEFV 2211
                .|...|......:|..|..:.|||::.:.:                   |:|..:::...:
plant   168 ----TNVAPDVIAPSPWKIFGCQNGLRLFKEAKDWDSRGRHWDDHPAIMAVGVIDGTSEDIFNTL 228

  Fly  2212 IK---QRASWDTNLLQCQTVKKLDDRTEIYQYALD------GQLTTDFCVLRSWQTDLPRGACVI 2267
            :.   .|:.||....:...|:.||..|:|....|.      |....|..:.|.|:.: ..|..||
plant   229 MSLGPLRSEWDFCFYKGNVVEHLDGHTDIIHLQLYSDWLPWGMNRRDLLLRRYWRRE-DDGTYVI 292

  Fly  2268 VETSIDHAKAKPLFGAVRGVVLASRYLIEPCGSGR-SRVMHLARVD 2312
            :..|:.|....|..|.||..|.:..|::.|..:|: |.|.|:..:|
plant   293 LCHSVYHKNCPPKKGYVRACVKSGGYVVTPANNGKQSLVKHMVAID 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-cNP_001097786.1 SAM_DLC1,2-like 1382..1441 CDD:188937
RhoGAP_DLC1 1893..2116 CDD:239840 28/144 (19%)
SRPBCC 2148..2343 CDD:472699 42/194 (22%)
AT3G54800NP_191040.2 PLN00188 11..730 CDD:215094 75/371 (20%)
Blue background indicates that the domain is not in the aligned region.

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